Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3437 ATGTTCTCTTCCTCAAGCTGCTTCTTTCTTTGCCTTCTCATCTTCTCTGTAACATTTTCTCACGTTTTGggggataaaatatttataggaacATATGGAGTAAACTACGGCAGGATAGCAGACAATCTGCCTTCTCCTCAGAGTGTGGTTACCCTTCTCAAAGCTGCGAAGATTAGAAACATCAGAATATATGATGCTGATCATCAAGTCCTGAGTGCCTTCAAAGGGTCTGGAATTGCAATTATTATTGGGCTACCAAATGAGTATCTGACAGACATAAGTGTGGGGGAGGATCGTGCCATGAATTGGATCAAGGAAAATGTTCAGCCATTTCTTCCAGGAACCAAAATTCGTGGCATTGCCGTGGGGAATGAAATATTGGGAGGCACAGATATGGAGCTATGGGAAGCTTTGGTGCCAGCAGCTAAAAATGTGTACACTGCCCTTGAAAGGCTTGATTTAGCACATACCATTCAGGTGTCGAGTCCACATTCAGAGGCTGTGTTTGCAAATTCCTACCCTCCATCTGCATGCACTTTTAAGGAGGATGTGCTCCCTTACATGAAGCCTCTCTTGCAATTTTTCTCACAAATTGGCACTCCTTTCTACATAAATGCATACCCCTTCTTGGCCTATAAGAATGACCCCCAACATATTGACATAAACTACGCTCTCTTCAAGAAAAATCCCGGGATTTATGATGCCAAGACCAAACTGCGCTATGACAACATGTTTGAGGCCCAAATTGATGCAGCTTATGTAGCCTTGGAGAAGGTTGGGTTTGACAAGATGGAGGTCATTGTTTCCGAGACTGGTTGGGCTTCTCGTGGGGATGACAATGAAGCTGGGGCAACAGTGAAAAATGCAAGGACTTACAATAAAAACTTGCGCAAGCTACTGCTCAAGAAAAAGGGCACCCCTTATAGGCCCAAGATGGCTGTGAGGGCTTACATCTTTGCTTTGTTTAATGAGAATTTGAAGCCTGGCCCAACATCTGAGAGAAACTTTGGATTGTTCAAGCCAGATGGAAGCATTGCATACGATATAGGCTTTACTGGGCTTGTACCTTCCTCAGCAACCTcgtcttttctttccttcaagGGTATTGGATCTTTATATGTAATGGTTTCTACAAGTTGTGcggcttttcttcttcttgtagCATTATAA 1170 0.412 MFSSSSCFFLCLLIFSVTFSHVLGDKIFIGTYGVNYGRIADNLPSPQSVVTLLKAAKIRNIRIYDADHQVLSAFKGSGIAIIIGLPNEYLTDISVGEDRAMNWIKENVQPFLPGTKIRGIAVGNEILGGTDMELWEALVPAAKNVYTALERLDLAHTIQVSSPHSEAVFANSYPPSACTFKEDVLPYMKPLLQFFSQIGTPFYINAYPFLAYKNDPQHIDINYALFKKNPGIYDAKTKLRYDNMFEAQIDAAYVALEKVGFDKMEVIVSETGWASRGDDNEAGATVKNARTYNKNLRKLLLKKKGTPYRPKMAVRAYIFALFNENLKPGPTSERNFGLFKPDGSIAYDIGFTGLVPSSATSSFLSFKGIGSLYVMVSTSCAAFLLLVAL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3437 389 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 7 374 IPR044965 GO:0004553|GO:0005975
Ssu4g3437 389 PANTHER GLYCOSYL HYDROLASE SUPERFAMILY PROTEIN 7 374 - -
Ssu4g3437 389 Gene3D Glycosidases 31 354 - -
Ssu4g3437 389 Pfam Glycosyl hydrolases family 17 33 351 IPR000490 GO:0004553|GO:0005975
Ssu4g3437 389 SUPERFAMILY (Trans)glycosidases 32 350 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3437 Ssu-Chr4 85005957 85007665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3437 28 360 Glycoside Hydrolase AT3G15800 77.545 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3437 - - gmx:100789056 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3437 4 85005957 85007665 Ssu4g3437 4 85005957 85007665 ECH
Ssu8g0113 8 1836213 1838110 Ssu4g3437 4 85005957 85007665 PCT