Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0112 ATGGCATCTGGCGCGGCTGCGGAAAAGATGAATAACGAGGTGGAAGATGGATATGTGTTCAAAGAAGAGATCCATCTGACGGTGCTCAAAACCTCTCTGTTCTTCGCAGGCGATGGTTTCACCGTATACGATTGCAAGGGTCAACTCGTGTTCAGGGTTGACTCTTACGGACCCGACACTCGCGACAGAGACGAACTCGTTCTCATGGATCCTAACGGACGTTGTCTCCTCACCGTTCGTCGAAAGAGGCCAAGTCTGCATCAGCGGTGGGAAGGCTTCAAAGGGGAGAGAGTGGACGGTGATAAACCCATCTTCAGCGTGAAGAGAGCGTCAATCCTAGGACGGTCGCGTGCGAGTTTGACGGTGGAGATGTACGATAACCCGGGTGAGGAGTACCAGATCGAAGGGTGCTTCTCGCAGCGTTGCTGCACGGTTTTCAACATGATGAAGGAATCGGTGGCTGAGATTCGTCGTAAAGTGGATCCCACCACCAACGTTGTGCTTGGGAAGGAAGTGTTCTCTCTTTGTGTTAAGCCCGGTTTTGATGCTGCTTTTGCCATGGGGTTTGTGCTTGTCCTCGATCAGATCAACGGTGAGGATCACGTTGATAATAATGCAACCACGGAGCCTGCGGTGCACCCTGCCACAGAGGATTAA 657 0.5221 MASGAAAEKMNNEVEDGYVFKEEIHLTVLKTSLFFAGDGFTVYDCKGQLVFRVDSYGPDTRDRDELVLMDPNGRCLLTVRRKRPSLHQRWEGFKGERVDGDKPIFSVKRASILGRSRASLTVEMYDNPGEEYQIEGCFSQRCCTVFNMMKESVAEIRRKVDPTTNVVLGKEVFSLCVKPGFDAAFAMGFVLVLDQINGEDHVDNNATTEPAVHPATED 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0112 218 PANTHER LURP-ONE-LIKE PROTEIN 15 207 - -
Ssu8g0112 218 SUPERFAMILY Tubby C-terminal domain-like 14 197 IPR025659 -
Ssu8g0112 218 Pfam LURP-one-related 13 192 IPR007612 -
Ssu8g0112 218 Gene3D - 14 202 IPR038595 -
Ssu8g0112 218 PANTHER - 15 207 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0112 Ssu-Chr8 1826047 1826988 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0112 - - gmx:100527456 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0112 8 1826047 1826988 Ssu8g0112 8 1826047 1826988 ECH
Ssu8g0112 8 1826047 1826988 Ssu4g3440 4 85024986 85026004 PCT