Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0019 ATGGGTTCAAGATTCCCATCTCATCAGCTCAGCAATGGCCTGTATGTATCAGGTCGGCCTGAACAGCCGAAAGAAAGAACTCCAACAATGAGCTCAGTTGCTATGCCTTACACTGGTGGTGACATCAAGAAATCAGGAGAATTAGGGAAAATGTTCGATATCCCCATGGATGGTTCTAAATCTAGAAAATCTGGTCAGCTAAATAATGCTCCTTCACGGACTGGATCATTTGCAGGTGCTGCTTCACATTCTGGAAGTATCTTGCCAAATACTGCAGCTCGTTCTATTTATACCACTTCAGGTAACATATCTTCTGGAGGTATGTCTGCTTCAGTCTCAATGAAAAAGACAAACTCTGGTCCACTGAATAAACATGGGGAACCTGTGAAGAAGTCATCTGGACCTCAATCTGGCGGAGTTACACGCCAAAACTCTGGTCCGATTCCACCTGTTCTTCCTACAACTGGTCTTATTACATCTGGTCCTCTAAATTCATCTGGGGCTCCAAGGAAGGTATCTGGTCCATTAGAGTTTACAGGATCAATGAAATCACATAGTTCTGTAGCTCACAATCCAGCCATGACCACTCTTGGCCTAGATGATGAATATTCCTTCAGGAGGAACTTCCCAAAGCCAATATTGTGGTCTGTAATTCTGATTTTTGTTATGGGATTCATTGCTGGTGCTTTTATTCTTGGAGCTGTCCACAATGCCATTCTCCTCGTTGTTGTAGTAGTTCTTTTTGGTACTGTTGCTGCATTATTCACATGGAATAGTTGTTGTGGGAGGACAGCCATTGTTGGTTTCATTTCTCGTTATCCTGACGCTGAGCTTAGAACTGCCAAGAATGGGCAATTTGTGAAGGTTTCTGGGGTGGTTACCTGTGGTAATGTTCCACTGGAGTCCTCCTTTCAAAAAGTTCCTAGATGTGTCTATACATCTACAAGCTTGTTTGAATATCGAGGGTGGGATTCAAAAGCAGCCAACCCAAAACATCGCCGTTTTACATGGGGACTCAGAGCAGCTGAGAGGCATGTAGTGGACTTCTACATTTCTGATTTCCAGTCAGGACTGAGAGCATTGGTTAAAACAGGCTATGGAGCAAGGGTGACTCCTTATGTTGACGATTCTATTGTAATTGATGTTAACCCTGACAATAAAGACATGTCCCCAGAGTTTCTTCGATGGTTGCAAGAGAGAAATCTTACGAGTGATGATCGAATGATGCGATTAAAAGAAGGGTACGTCAAAGAAGGTAGCACAGTTAGCGTAATGGGAGTCGTTCAAAGAAATGACAATGTACTTATGATTGTCCCTCCTCCTGAGCCTTTGACTACCGGATGCCAATGGGCTAAATGTATATTTCCAGCTAGCCTTGAGGGTATTATTTTGAGATGTGAGGATACATCAAAGATTGATGTCATTCCAGTATAG 1434 0.4303 MGSRFPSHQLSNGLYVSGRPEQPKERTPTMSSVAMPYTGGDIKKSGELGKMFDIPMDGSKSRKSGQLNNAPSRTGSFAGAASHSGSILPNTAARSIYTTSGNISSGGMSASVSMKKTNSGPLNKHGEPVKKSSGPQSGGVTRQNSGPIPPVLPTTGLITSGPLNSSGAPRKVSGPLEFTGSMKSHSSVAHNPAMTTLGLDDEYSFRRNFPKPILWSVILIFVMGFIAGAFILGAVHNAILLVVVVVLFGTVAALFTWNSCCGRTAIVGFISRYPDAELRTAKNGQFVKVSGVVTCGNVPLESSFQKVPRCVYTSTSLFEYRGWDSKAANPKHRRFTWGLRAAERHVVDFYISDFQSGLRALVKTGYGARVTPYVDDSIVIDVNPDNKDMSPEFLRWLQERNLTSDDRMMRLKEGYVKEGSTVSVMGVVQRNDNVLMIVPPPEPLTTGCQWAKCIFPASLEGIILRCEDTSKIDVIPV 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0019 477 MobiDBLite consensus disorder prediction 61 85 - -
Ssu8g0019 477 PANTHER OSJNBA0035M09.9 PROTEIN 1 477 IPR040339 -
Ssu8g0019 477 MobiDBLite consensus disorder prediction 134 150 - -
Ssu8g0019 477 MobiDBLite consensus disorder prediction 104 120 - -
Ssu8g0019 477 MobiDBLite consensus disorder prediction 1 85 - -
Ssu8g0019 477 MobiDBLite consensus disorder prediction 1 16 - -
Ssu8g0019 477 MobiDBLite consensus disorder prediction 104 150 - -
Ssu8g0019 477 PANTHER UBIQUITIN-SPECIFIC PROTEASE FAMILY C19 PROTEIN 1 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0019 Ssu-Chr8 485106 487711 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0019 - - gmx:100807593 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0019 8 485106 487711 Ssu4g3566 4 86705936 86710952 PCT