Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3566 ATGGGTTCAAGATTCCCATCTCATCAGCTCAGCAATGGCCTGTATGTATCAGGCCGGCCTGAACAGCCAAAAGAAAAGACTCCAACAATGAGCTCAGTTGCCATGCCCTATACTGGTGGTGACATCAAGAAGTCAGGAGAATTAGGGAAAATGTTTGATATCCCCATGGATGGCTCTAAATCTAGAAAATCTGGTCCATTAAATAATGCACCTTCAAGGACAGGATCATTTGCAGGTGCTGCTTCACACTCTGGACCTATCATGCAAAATGCTGCAGCTCGTTCTGTTTATATCACATCTGGTAATGTATCTACTGGAGTTATGTCTGCTTCAGCCTCAATGAAAAAGACCAACTCTGGTCCATTGAATAAACATGGGGAACCAGTCAAGAAGTCATCTGGCCCTCAATCCGGTGGAGTTACACGCCAAAACTCTGGTCCAATTCCTCCAGTTCTTCCTACGACTGGTCTTATTACATCTGGCCCATTAAATTCATCTGGGGCTCCAAGGAAAGTGTCTGGTCCTTTAGATTCTACAGGATCAATGAAATCATATAGTTCCTCTGTAGCCCACAATCCTGCTGTAACCACTCTTAGCCTAGATGATGAATATTCCTTCAGGAGGAACTTCCCAAAGCCAATATTGTGGTCTGTGATTCTGATTTTTATAATGGGATTCATTGCTGGTGGTTTTATTCTTGGAGCCGTCCACAATGCCATTCTCCTTATTGTTGTCGTAGTTCTTTTTGGTGCGGTTGCTGCATTATTCACGTGGAATAGTTATTTTGGAAGGAAAGCCATTGTTGGTTTCATTTCCCGTTATCCAGATGCAGAGCTTAGAACTGCCAAGAATGGGCAATTTGTGAAGGTTTCTGGGGTGGTTACCTGCGGTAATGTTCCACTAGAGTCTTCCTTTCAAAAAGTTCCTAGATGTGTATATACATCCACAAGCTTGTATGAATATCGAGGATGGGATTCAAAAGCAGCAAACCCAAAACATCGCCGTTTTACATGGGGACTTAGATCAGCTGAGAGGCATGTAGTGGACTTTTACATCTCTGATTTCCAATCTGGATTGAGAGCATTGGTTAAAACAGGCTACGGTGCAAGGGTGACTCCTTATGTTGATGATTCCACTGTTATTGATGTTAATCCGGCCAATAAAGACATGTCCCCTGAGTTTCTTCGATGGTTGGGAGAGAGAAAACTTTCTAGTGATGATCGTATAATGCAATTAAAAGAAGGGTACATCAAAGAAGGTAGCACGGTTAGTGTAATGGGAGTTGTTCAAAGAAATGACAATGTGCTTACGATTGTCCCTCCACCTGAGCCTTTGACTACCGGATGCCAATGGGCCAAATGTATATTTCCAGCTAGCCTTGAGGGCATTGTTTTGAGATGTGAAGATACGTCAAAGATTGATGTCATTCCAGTTTAG 1437 0.4287 MGSRFPSHQLSNGLYVSGRPEQPKEKTPTMSSVAMPYTGGDIKKSGELGKMFDIPMDGSKSRKSGPLNNAPSRTGSFAGAASHSGPIMQNAAARSVYITSGNVSTGVMSASASMKKTNSGPLNKHGEPVKKSSGPQSGGVTRQNSGPIPPVLPTTGLITSGPLNSSGAPRKVSGPLDSTGSMKSYSSSVAHNPAVTTLSLDDEYSFRRNFPKPILWSVILIFIMGFIAGGFILGAVHNAILLIVVVVLFGAVAALFTWNSYFGRKAIVGFISRYPDAELRTAKNGQFVKVSGVVTCGNVPLESSFQKVPRCVYTSTSLYEYRGWDSKAANPKHRRFTWGLRSAERHVVDFYISDFQSGLRALVKTGYGARVTPYVDDSTVIDVNPANKDMSPEFLRWLGERKLSSDDRIMQLKEGYIKEGSTVSVMGVVQRNDNVLTIVPPPEPLTTGCQWAKCIFPASLEGIVLRCEDTSKIDVIPV 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3566 478 PANTHER OSJNBA0035M09.9 PROTEIN 1 478 IPR040339 -
Ssu4g3566 478 MobiDBLite consensus disorder prediction 62 79 - -
Ssu4g3566 478 MobiDBLite consensus disorder prediction 111 150 - -
Ssu4g3566 478 MobiDBLite consensus disorder prediction 134 150 - -
Ssu4g3566 478 MobiDBLite consensus disorder prediction 1 16 - -
Ssu4g3566 478 PANTHER UBIQUITIN-SPECIFIC PROTEASE FAMILY C19 PROTEIN 1 478 - -
Ssu4g3566 478 MobiDBLite consensus disorder prediction 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3566 Ssu-Chr4 86705936 86710952 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3566 - - gmx:100775520 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0019 8 485106 487711 Ssu4g3566 4 86705936 86710952 PCT