Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3217 ATGTCGAGGGGAAGATCTGATGGATCGCAAAAGAAGCGTTTAGTTGCTTCCATTTGTGGTGTGGCAATCTTTCTTGGTTTTCTATATGTTTACCATGGATCCATCTTTGATTCTCAGAATGGCGGTTCATCTGCACTTGAGTATGGCAGCAAGTCATTGAAAAGACTTGGGGCATCATATTTGGGTGCAGATGATGATGCTGATAGCAAGCAAGATGAATCTTCATCAAGTATTGGGCAGGGAGACGGTGAGGATGATATTGTACCAAAGAGTTTCCCTGTTTGTGATGATCGTCATTCGGAGTTGATTCCCTGCTTAGACAGACATCTTATTTATCAAATGAGACTGAAACTGGATCTTTCTTTGATGGAACACTATGAGAGACATTGTCCTCCTGCAGAAAGGAGGTACAATTGTTTGATTCCTCCTCCAGCAGGATACAAGGTCCCTATTAAGTGGCCACAGAGTAGAGATGAGGTGTGGAAAGCAAATATTCCACACACTCACCTTGCACATGAGAAGTCTGACCAGAACTGGATGATTGTAAAAGGTGAAAAGATAGTGTTTCCTGGAGGAGGGACACATTTTCACTATGGAGCTGACAAGTACATTGCATCAATTGCAAAGATGctcaatttttcaaacaataatcTTAATAATGAAGGAAGACTGCGGACTGTGCTTGATGTTGGCTGTGGTGTTGCGAGTTTTGGAGCATATCTTCTTTCATCTGATATCATTGCAATGTCCTTGGCACCCAATGATGTGCATCAGAATCAAATTCAGTTTGCTCTAGAAAGAGGAATTCCTGCATATCTTGGTGTCTTGGGAACTAAGAGACTCCCTTACCCTAGCAGATCTTTTGAACTTGCACACTGTTCCCGTTGTCGGATTGATTGGCTTCAAAGGGATGGAATACTACTCCTTGAGCTAGACCGGTTGCTTAGGCCGGGAGGTTATTTTGCATACTCATCTCCAGAAGCATATGCTCAGGATGAAGAGGATCGAAGGATATGGAGAGAAATGAGTGCCCTTGTGGGACGTATGTGTTGGAGAATTGCTGCAAAGAGGGACCAAACCGTCATCTGGCAAAAGCCTCTGACAAATGAATGCTATATGGAGAGAGAACCCGGCACTCGCCCTCCTCTTTGCCAGTCTGATGATGACCCAGATGCAGTTTGGGGAGTGAATATGGAAGCCTGCATAACACCTTACTCTGACCATGACAACAGAGCCAAGGGTAGTGGATTGGCTCCATGGCCTGCAAGATTGACCACTCCTCCTCCTAGATTAGCTGACTTTGGCTATACAAATGAAATGTTTGAAAAGGATACGGAACTATGGCAAGGAAGAGTTGAGAATTACTGGAATCTGTTGAGTCCAAAAATCTCGTCAAAAACATTGAGGAATGTGATGGACATGAAAGCAAACATGGGTTCATTTGCAGCTGCTCTTAGAGGCAAGGATGTTTGGGTGATGAATGTTGTACCTCGTGATGGACCAAGCACACTTAAGCTTATCTATGACAGAGGCCTCATAGGGACTACCCATGACTGGTGTGAAGCATTTTCAACATACCCCCGGACTTATGATTTACTCCATGCATGGACTGTGTTTTCTGACCTTGAAAAGAGAGAATGCAGTCCAGAGGATCTATTGATTGAGATGGACCGTATGCTTAGGCCTACTGGTTTCATCATCATAAGGGATAAACACCAtgtgattgattttgtcaagaaGTACCTAACAGCATTGCACTGGGAAGCAGTTGCAACTGCAGATTCCAGTTCTGACTCTGACCAAGATGGCAATGAAGTTATTTTTGTCATCCAGAAGAAATTGTGGCTCACCACTGAAAGCCTTAGGAATACAGAATAG 1878 0.4302 MSRGRSDGSQKKRLVASICGVAIFLGFLYVYHGSIFDSQNGGSSALEYGSKSLKRLGASYLGADDDADSKQDESSSSIGQGDGEDDIVPKSFPVCDDRHSELIPCLDRHLIYQMRLKLDLSLMEHYERHCPPAERRYNCLIPPPAGYKVPIKWPQSRDEVWKANIPHTHLAHEKSDQNWMIVKGEKIVFPGGGTHFHYGADKYIASIAKMLNFSNNNLNNEGRLRTVLDVGCGVASFGAYLLSSDIIAMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDRRIWREMSALVGRMCWRIAAKRDQTVIWQKPLTNECYMEREPGTRPPLCQSDDDPDAVWGVNMEACITPYSDHDNRAKGSGLAPWPARLTTPPPRLADFGYTNEMFEKDTELWQGRVENYWNLLSPKISSKTLRNVMDMKANMGSFAAALRGKDVWVMNVVPRDGPSTLKLIYDRGLIGTTHDWCEAFSTYPRTYDLLHAWTVFSDLEKRECSPEDLLIEMDRMLRPTGFIIIRDKHHVIDFVKKYLTALHWEAVATADSSSDSDQDGNEVIFVIQKKLWLTTESLRNTE 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3217 625 MobiDBLite consensus disorder prediction 64 90 - -
Ssu7g3217 625 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 371 IPR029063 -
Ssu7g3217 625 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 622 - -
Ssu7g3217 625 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 1 622 IPR004159 GO:0008168
Ssu7g3217 625 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 101 612 IPR004159 GO:0008168
Ssu7g3217 625 Gene3D Vaccinia Virus protein VP39 216 365 IPR029063 -
Ssu7g3217 625 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 432 581 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3217 Ssu-Chr7 76566728 76570873 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3217 - - gmx:100780043 1214.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1216 4 19305229 19311532 Ssu7g3217 7 76566728 76570873 PCT