Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3213 ATGAACTCACTCCAAGATTTTGAATCCTCTTCAAGCAAAACTCTCAACCCTATGACAAACCTAACCTCTTCCTCTACcttgtcctcagcatcatcGTCAACATCATCGACGATGACGACGACGACAACAGCAACACCAACAACCACGTCATCACCACCTTCCACCCCGAGTCGCTACGAGAACCAAAAGCGAAGGGACTGGAACACTTTTGGCCAATACCTCAGAAACCACAGGCCCCCACTTTCCCTCTCTCGCTGCAGCGGCGCCCATGTGCTCGAGTTCCTGCGCTACCTCGACCAGTTCGGGAAAACCAAGGTTCACACGCAGCTCTGTCCCTTCTTTGGCCACCCAAACCCACCTGCACCGTGTCCCTGCCCTCTGCGCCAAGCGTGGGGGAGCCTCGACGCCCTCATAGGTCGCCTCAGAGCCGCTTTTGAAGAGAACGGAGGAAAACCTGAGGCCAACCCTTTTGGTGCTCGTGCTGTGAGGCTTTACCTTCGAGAAGTTCGCGACTCACAGGCCAAAGCTAGAGGCATCAGCTATGTGAAAAAGAAGCGCAAGCGTCCCCCTCACCCACCTCCATCAAATGCAACAACTCAGTAG 603 0.5307 MNSLQDFESSSSKTLNPMTNLTSSSTLSSASSSTSSTMTTTTTATPTTTSSPPSTPSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTQLCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARGISYVKKKRKRPPHPPPSNATTQ 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3213 200 PANTHER PROTEIN G1-LIKE5 25 196 - -
Ssu7g3213 200 MobiDBLite consensus disorder prediction 1 58 - -
Ssu7g3213 200 PANTHER PROTEIN G1-LIKE2 25 196 IPR040222 -
Ssu7g3213 200 Pfam ALOG domain 49 171 IPR006936 -
Ssu7g3213 200 ProSiteProfiles ALOG domain profile. 58 185 IPR006936 -
Ssu7g3213 200 MobiDBLite consensus disorder prediction 1 65 - -
Ssu7g3213 200 MobiDBLite consensus disorder prediction 173 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3213 Ssu-Chr7 76449611 76450213 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3213 - - tcc:18603230 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1222 4 19460419 19461322 Ssu7g3213 7 76449611 76450213 PCT