Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2845 ATGTCTGGCTCAGCAAAAAATTTGGATCCTGCATTCCAGGGAGTGGGTCAAAGAGTAGGAACTGAAATATGGAGGATTGAGAATTTTCAGCCAGTTCCATTGCCCAAATCCGAGTATGGGAAATTCTACATGGGAGATTCTTACATAATCTTGCAGACAACTCAAGGCAAAGGAGGcacttatttttatgatttacaCTTCTGGATTGGAAAGGATACAAGTCAGGATGAGGCTGGAACTGCAGCCATTAAAACTGTTGAACTTGATACTGCTCTTGGAGGGCGTGCAGTGCAGCACAGGGAAATCCAAGGACATGAATCTGACAAGTTTTTGTCATACTTTAAACCATGTATAATACCATTGGAGGGAGGTGTTGCATCTGGGTTTAGAAAGCCTGAAGAAGAGGAGTTCGAAACACGTTTGTATGTATGCAGAGGGAAAAGAGTTGTAAGATTGAAACAGGTCCCTTTTGCAAGGTCTTCATTGAACCATGATGATGTATTCATACTAGACACTCAGAATAAGATTTATCAATTCAATGGTGCAAATTCCAATATTCAGGAAAGAGCCAAGGCTTTGGAAGTTATACAGTTTctgaaagaaaaatatcatgAAGGGAAATGTGATGTTGCAATTGTTGATGATGGCAAGTTAGACACTGAGTCAGACTCAGGTGAATTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTAATGAGTGAGGATGATATTATTCCAGAGACAATTCCTGCTCAGCTTTATAGTATTGTTGATGGTGAGGTTAAGCCTGTGGAAGGTGAACTTTCTAAATCACTGTTGGAAAACAACAAATGCTATTTACTGGACTGCGGTGCTGAGATATTTGTCTGGGTTGGCCGTGTAACACAACTTGAAGAACGAAAAGCAGCCTGCCAAGCCGTTGAGGAGTTTGTTGCAAGCCAAAATAGGCCAAAATCTACAAGGATAACCAGGATTATTCAAGGTTATGAGACACATGCATTTAAGTCCAACTTTGATTCTTGGCCATCAGGCTCTGCTAGTACCAGTGCCGAGGAAGGAAGAGGAAAAGTTGCAGCATTGCTCAAGCAACAAGGTATGGGTGTCAAAGGAATGACAAAAAGTACCCCTGTAAGTGAGGAAATTCCACCTTTGCTTGAAGGAGGTGGGAAGATAGAGgtaTGGCGAATCAATGGAAATGCCAAGACTGCATTGCCAAAGGAGGAGATTGGTAAATTTTATAGTGGGGATTGTTACATTGCACTGTACACATACCACTCTGGTGAGAGGAAAGAAGACTACTACTTGTGCTGTTGGTTTGGCAAAGACAGCATTGAGGAGGATGGAACAACGGCTACTCGGTTGGCCAGTACAATGTTTACCTCATTAAAGGGTAGACCTGTACAGGGTCGTATATTTGAAGGCAAAGAGCCACCACAGTTTGTTGCTCTTTTCCAACCAATGGTGGTCCTTAAGGGAGGACTGAGCTCTGGATACAAGAAATTAATAGCCGACAAAGGTGTATCAGATGAGACATATACAGCAGAGTCTATTGCACTTATTCGAATTTCTGGAACTTCTATTCATAACAATAAATCAGTACAAGTTGACGCAGTGCCATCATCATTGAATTCTACTGAGTGTTTTGTCCTGCAATCTGGCTCTACAATTTTCACTTGGCATGGAAATCAGTGTTCCTTTGAGCAGCAACAGCTAGCAGCAAAGGTTGCTGAATTTTTAAGGCCAGGAGTTACGTTAAAGTATGCTAAAGAAGGAACAGAAAGCTCAGCTTTCTGGTTTGCACTAGGAGGAAAACAAAGTTACACCAGCAAGAAAGTTGTTAATGAGGTTGTCAGAGATCCACATTTGTTcactttatcatttaataaagGAAAGTTCAATGTAGAGGAGGTTTACAACTTCTCTCAAGATGACCTATTGACGGAAGATATCCTCATACTTGACACACATGCAGAAGTGTTTATTTGGATTGGTCAGTCTGTTGAcccaaaagaaaagcaaaatgcTTTTGAAATTGGCCAGAAATACATAGATATGGCTACATCTCTGGAGGGGCTACATCCGCATGTTCCACTATATAAAGTAACAGAAGGGAACGAACCTTGCTTCTTCACAACATGCTTTTCATGGGATCATGCAAAAGCTATGGTTCAGGGCAACTCATTCCAGAAAAAGGTGTCACTACTCTTTGGGATTGGCCACGCTGTGGAGGAAAAGTCGAATGGGTCAAGTCTTGGGGGACCAAGACAAAGGGCAGAAGCTTTGGCTGCCTTATCTAATGCATTTAGCTCATCTTCTGACAAATCATCCAGTATGACACAAGATAGATTGAATGGGTTAAGCCAAGGAGGACCAAGACAAAGGGCAGAAGCTTTAGCCGCTTTAAACTCTGCATTTACTTCATCATCTGGGATGAAGACTTTTACTCCTAAGCCATCTGGAAGAGGTCAAGGATCACAAAGAGCAGCAGCAGTGGCTGCTCTTTCATCGGTCCTTACTGCTGAAAAGACGAAAAAGTCACCTGATGGTTCTCCTGTGGCTAGCAGTAGTCCTGTCGCCGAAAGTAGCGCTGCTGAAACTAAAAGTGACTCCTCTGAAGTTGAAGAAGTTTCAGAAGCCAAGGAAACAGAGGAACTAGCCCCTGAAACCGGTAGCAATGGGGATTCGgaaccaaaacaagaaaatgtgGAGGATGGAAATGATAGTCGAAGGACGTTCAGTTATGATCAATTAAAGACTAAATCTGGTCATAATGTGCCTGGAATTGATCTTAAACGGAGAGAGGCCTATCTGTCGGACGAGGAGTTCAACACTGTATTTGGCATGGCAAAAGAAGCATTTTATATGTTGCCAAGATGGAAGCAAGACATGCTGAAAAAGAAATTCGAATTGTTCTAG 2925 0.4113 MSGSAKNLDPAFQGVGQRVGTEIWRIENFQPVPLPKSEYGKFYMGDSYIILQTTQGKGGTYFYDLHFWIGKDTSQDEAGTAAIKTVELDTALGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFRKPEEEEFETRLYVCRGKRVVRLKQVPFARSSLNHDDVFILDTQNKIYQFNGANSNIQERAKALEVIQFLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVMSEDDIIPETIPAQLYSIVDGEVKPVEGELSKSLLENNKCYLLDCGAEIFVWVGRVTQLEERKAACQAVEEFVASQNRPKSTRITRIIQGYETHAFKSNFDSWPSGSASTSAEEGRGKVAALLKQQGMGVKGMTKSTPVSEEIPPLLEGGGKIEVWRINGNAKTALPKEEIGKFYSGDCYIALYTYHSGERKEDYYLCCWFGKDSIEEDGTTATRLASTMFTSLKGRPVQGRIFEGKEPPQFVALFQPMVVLKGGLSSGYKKLIADKGVSDETYTAESIALIRISGTSIHNNKSVQVDAVPSSLNSTECFVLQSGSTIFTWHGNQCSFEQQQLAAKVAEFLRPGVTLKYAKEGTESSAFWFALGGKQSYTSKKVVNEVVRDPHLFTLSFNKGKFNVEEVYNFSQDDLLTEDILILDTHAEVFIWIGQSVDPKEKQNAFEIGQKYIDMATSLEGLHPHVPLYKVTEGNEPCFFTTCFSWDHAKAMVQGNSFQKKVSLLFGIGHAVEEKSNGSSLGGPRQRAEALAALSNAFSSSSDKSSSMTQDRLNGLSQGGPRQRAEALAALNSAFTSSSGMKTFTPKPSGRGQGSQRAAAVAALSSVLTAEKTKKSPDGSPVASSSPVAESSAAETKSDSSEVEEVSEAKETEELAPETGSNGDSEPKQENVEDGNDSRRTFSYDQLKTKSGHNVPGIDLKRREAYLSDEEFNTVFGMAKEAFYMLPRWKQDMLKKKFELF 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2845 974 MobiDBLite consensus disorder prediction 842 869 - -
Ssu7g2845 974 ProSiteProfiles Headpiece (HP) domain profile. 909 974 IPR003128 GO:0003779|GO:0007010
Ssu7g2845 974 SMART VHP_1 939 974 IPR003128 GO:0003779|GO:0007010
Ssu7g2845 974 MobiDBLite consensus disorder prediction 870 890 - -
Ssu7g2845 974 SUPERFAMILY VHP, Villin headpiece domain 909 974 IPR036886 GO:0003779|GO:0007010
Ssu7g2845 974 MobiDBLite consensus disorder prediction 900 919 - -
Ssu7g2845 974 Gene3D Severin 614 735 IPR029006 -
Ssu7g2845 974 SUPERFAMILY Actin depolymerizing proteins 9 148 - -
Ssu7g2845 974 MobiDBLite consensus disorder prediction 811 825 - -
Ssu7g2845 974 MobiDBLite consensus disorder prediction 772 790 - -
Ssu7g2845 974 CDD gelsolin_S4_like 386 487 - -
Ssu7g2845 974 SUPERFAMILY Actin depolymerizing proteins 510 612 - -
Ssu7g2845 974 MobiDBLite consensus disorder prediction 811 929 - -
Ssu7g2845 974 Gene3D Villin headpiece domain 895 974 IPR036886 GO:0003779|GO:0007010
Ssu7g2845 974 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Ssu7g2845 974 PRINTS Gelsolin family signature 645 667 IPR007122 GO:0051015
Ssu7g2845 974 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Ssu7g2845 974 PRINTS Gelsolin family signature 674 693 IPR007122 GO:0051015
Ssu7g2845 974 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Ssu7g2845 974 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Ssu7g2845 974 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Ssu7g2845 974 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Ssu7g2845 974 SUPERFAMILY Actin depolymerizing proteins 383 528 - -
Ssu7g2845 974 PANTHER VILLIN-3-LIKE ISOFORM X1 1 974 - -
Ssu7g2845 974 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
Ssu7g2845 974 CDD gelsolin_S5_like 519 609 - -
Ssu7g2845 974 CDD gelsolin_S3_like 254 343 - -
Ssu7g2845 974 SUPERFAMILY Actin depolymerizing proteins 596 718 - -
Ssu7g2845 974 CDD gelsolin_S6_like 622 720 - -
Ssu7g2845 974 Gene3D Severin 519 613 IPR029006 -
Ssu7g2845 974 Gene3D Severin 142 236 IPR029006 -
Ssu7g2845 974 Pfam Villin headpiece domain 939 974 IPR003128 GO:0003779|GO:0007010
Ssu7g2845 974 SMART VILL_6 139 234 IPR007122 GO:0051015
Ssu7g2845 974 SMART VILL_6 518 607 IPR007122 GO:0051015
Ssu7g2845 974 SMART VILL_6 392 490 IPR007122 GO:0051015
Ssu7g2845 974 SMART VILL_6 624 719 IPR007122 GO:0051015
Ssu7g2845 974 SMART VILL_6 19 117 IPR007122 GO:0051015
Ssu7g2845 974 SMART VILL_6 251 344 IPR007122 GO:0051015
Ssu7g2845 974 CDD gelsolin_S1_like 12 124 - -
Ssu7g2845 974 Gene3D Severin 389 518 IPR029006 -
Ssu7g2845 974 Gene3D Severin 6 141 IPR029006 -
Ssu7g2845 974 Pfam Gelsolin repeat 150 217 IPR007123 -
Ssu7g2845 974 Pfam Gelsolin repeat 411 483 IPR007123 -
Ssu7g2845 974 Pfam Gelsolin repeat 29 111 IPR007123 -
Ssu7g2845 974 Pfam Gelsolin repeat 635 713 IPR007123 -
Ssu7g2845 974 Pfam Gelsolin repeat 264 337 IPR007123 -
Ssu7g2845 974 Pfam Gelsolin repeat 534 583 IPR007123 -
Ssu7g2845 974 CDD gelsolin_S2_like 138 232 - -
Ssu7g2845 974 Gene3D Severin 248 359 IPR029006 -
Ssu7g2845 974 PANTHER VILLIN 1 974 IPR007122 GO:0051015
Ssu7g2845 974 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Ssu7g2845 974 MobiDBLite consensus disorder prediction 772 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2845 Ssu-Chr7 59800933 59812327 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2845 - - gmx:100788765 1726.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2845 7 59800933 59812327 Ssu7g2845 7 59800933 59812327 ECH
Ssu4g1493 4 25209055 25219977 Ssu7g2845 7 59800933 59812327 PCT