Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2816 ATGTTGAATGATCAAACACCTTCCACAAGCCATGCCACAGAGGAAAACACTGACGGTGCTGAAAATGAAcaacaaataagagaaatccACGCCTTGACCCCACCCCCGAGAAGAGAGCCTAACTGggaaacacacacacagagcCACAGCGACCACTCGTCTTCTGTATCCAGCGATAACTTCACCAGCATGAGTAGGGAGTTCAGTGCCCTCGTTCTAGCGGGCTCAAGCATCGACCCCAACACCACCACCCCAAGTCCCATGAGCGCGATGCATGGCAGCGAAGAAGGTAGTAATGGTAACATTAACAGCAAcagcagcagcaacaacaacaacttggGGAGGATTGGAGAGGATGAGTTGTTGATGATGGAAGAGACTAACCCTTTGGCTATCGTGGCAGACACCAACCCTTTGGAGGCGGTTTCGTCATCGCCGCCTCCAAGGCGTGGAGGGTCTTCTTCGGCTTTGGGTGGTAGTGTCGGCGAGGTGACGGTGCAGAGAGTGAGGAAGGAGGAGGTTGAAGCGAAGATAGGGGCTTGGCAAACCGCTAAGGTTGCTAAGATCAATAACAGGTTCAAGAGGGAAGATGCTGTTATCAATGGGTGGGAGAACGAGCAGGTTCAGAAAGCAAGTTCATGGATGAAGAAAGTTGAGAGGAAGCTGGAGGAGAAAAGAGCAAAAGCACTGGAGAAAATGCAAAATGAGGTAGCAAAAGCTCATAGAAAAGCTGAGGAGAGGAGGGCATCAGCAGAGGCCAAAAGGGGAACTAAAGTAGCCAGGGTTCTGGAGATTGCCAACCTTATGAGAGCAGTTGGAAGAGCCCCTACCAAAAGATCTTTCTTTTAA 849 0.4676 MLNDQTPSTSHATEENTDGAENEQQIREIHALTPPPRREPNWETHTQSHSDHSSSVSSDNFTSMSREFSALVLAGSSIDPNTTTPSPMSAMHGSEEGSNGNINSNSSSNNNNLGRIGEDELLMMEETNPLAIVADTNPLEAVSSSPPPRRGGSSSALGGSVGEVTVQRVRKEEVEAKIGAWQTAKVAKINNRFKREDAVINGWENEQVQKASSWMKKVERKLEEKRAKALEKMQNEVAKAHRKAEERRASAEAKRGTKVARVLEIANLMRAVGRAPTKRSFF 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2816 282 Coils Coil 215 254 - -
Ssu7g2816 282 MobiDBLite consensus disorder prediction 1 62 - -
Ssu7g2816 282 Pfam Remorin, C-terminal region 173 278 IPR005516 -
Ssu7g2816 282 PANTHER CARBOXY-TERMINAL REGION REMORIN 15 281 - -
Ssu7g2816 282 MobiDBLite consensus disorder prediction 75 114 - -
Ssu7g2816 282 MobiDBLite consensus disorder prediction 1 15 - -
Ssu7g2816 282 MobiDBLite consensus disorder prediction 47 62 - -
Ssu7g2816 282 PANTHER OS02G0116800 PROTEIN 15 281 - -
Ssu7g2816 282 MobiDBLite consensus disorder prediction 139 160 - -
Ssu7g2816 282 MobiDBLite consensus disorder prediction 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2816 Ssu-Chr7 58777629 58779705 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2816 - - gmx:100784687 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2816 7 58777629 58779705 Ssu7g2816 7 58777629 58779705 ECH
Ssu4g1475 4 24618462 24620757 Ssu7g2816 7 58777629 58779705 PCT