Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1475 ATGTCGAACGATCCAACCGCTGCTTCCAGGGGCCACGGATCAGAGGAAGAGCAAGAAGATGAACACGTCACTGACATCAGAGAAATCCACGCACTAACCCCGCCTCGCCCTCCACCGCCACGTGGCCGTTGGGAAACACTACACGGTCACAGGTCATCTTCTCTGTCTGTAGCCAGCACCGAAGGTGCCGAGAACTTCACCAGCATGAGCAGAGAATTCAGTGCTTTGGTTCTCGCGGGGTCCAGCATCGACCACGACAACGTAAGCCCTTTGAATGAAGCGggcaacaacaacagcaacaacaacaacttggGGAGGATCAGAGAAGAGGACTTGATGGAAGAGACGAACCCTTTGGCGATCGTGCCGGATAACCACCCTCTGGACCCGGTTCCGTCTCAGGGAAGGACACGTGGCGGTGGCGGTGAGGAACACGTGTCGGTGCAGAGGGTGAAGAAGGAGGAGGTGGATGCCAAGATATCGGCGTGGCAGAACGCCAAAGTGGCGAAGATTAACAACAGGTTCAAGAGGGAGGACGCTGTGATCAATGGGTGGGAGAGCGAGCAGGCTCAGAAAGCTACCTCTTGGATGAAAAAAGTTGAGAGGAAGCTGGAGGAGAAAAGGGCAAGAGCGATGGAGAAAATGCAAAACGACATAGCAAAAGCTCATAGAAAAGCAGAGGAGAGAAGGGCATCAGCAGAGGCAAAAAGGGGAACCAAAGTGGCCAGGGTTCTGGAGATTGCTAGTCTCATGAGAGCAGTTGGAAGACCTCCTGCCAAAAAATCCTTCTTCAAAgctgtttaa 804 0.5112 MSNDPTAASRGHGSEEEQEDEHVTDIREIHALTPPRPPPPRGRWETLHGHRSSSLSVASTEGAENFTSMSREFSALVLAGSSIDHDNVSPLNEAGNNNSNNNNLGRIREEDLMEETNPLAIVPDNHPLDPVPSQGRTRGGGGEEHVSVQRVKKEEVDAKISAWQNAKVAKINNRFKREDAVINGWESEQAQKATSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPAKKSFFKAV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1475 267 Pfam Remorin, C-terminal region 155 259 IPR005516 -
Ssu4g1475 267 PANTHER - 18 263 - -
Ssu4g1475 267 MobiDBLite consensus disorder prediction 120 151 - -
Ssu4g1475 267 PANTHER OS02G0116800 PROTEIN 18 263 - -
Ssu4g1475 267 MobiDBLite consensus disorder prediction 10 29 - -
Ssu4g1475 267 MobiDBLite consensus disorder prediction 1 60 - -
Ssu4g1475 267 MobiDBLite consensus disorder prediction 217 236 - -
Ssu4g1475 267 Coils Coil 197 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1475 Ssu-Chr4 24618462 24620757 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1475 - - aprc:113862352 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1475 4 24618462 24620757 Ssu4g1475 4 24618462 24620757 ECH
Ssu4g1475 4 24618462 24620757 Ssu7g2816 7 58777629 58779705 PCT