Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2813 ATGGTAATCTATATGGGACCAGTGTTGAGGCCGTGGAGCGGGTATCAGACTGCAGGAAAAAGATGTATTCTTGATATTGATGTTCAAGGGGCAAGATCCGTGAGGGCTAGTTCTCTTGAAGCCATATTCATCTTTATCTGCCCCCCATCAATGGAAGAGCTGGAAAAGCGTCTTTGTGACCGTGGGACAGAGACACAAGAACAGGTTCTAAAGCGACTACGAAATGCTCAGAATGAGATTGAGCAAGGGAAATCATCAGGCATATTTGATCACATCTTATATAATGACACACTTGAGGAGTGTTATGAGAATCTGAAGAAATTATTGGGACTTGATGGTTGTGTCACTCCTCCTCCCAAGTCAGCATCAAAAGAGATCAATCTGCCAAGGGATCATTCAGTGTCAAAAATTGATGACAAAGTCATCATAAACTGCACCTCTTCAGGACTAGAAAAGGAATCAAAGAACTTGATCATGTTAGATGTCTCCTCACTTAAAGGGGGTGCACCTGGACGGACAAGAGGACTAGATTTGAAGTCATTGACTCGTTTTCAGGTGGCTTCATTGGCAATGGGAATGGACCATTTTGACATTCAATGA 600 0.4283 MVIYMGPVLRPWSGYQTAGKRCILDIDVQGARSVRASSLEAIFIFICPPSMEELEKRLCDRGTETQEQVLKRLRNAQNEIEQGKSSGIFDHILYNDTLEECYENLKKLLGLDGCVTPPPKSASKEINLPRDHSVSKIDDKVIINCTSSGLEKESKNLIMLDVSSLKGGAPGRTRGLDLKSLTRFQVASLAMGMDHFDIQ 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2813 199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 109 IPR027417 -
Ssu7g2813 199 Gene3D - 14 112 IPR027417 -
Ssu7g2813 199 ProSiteProfiles Guanylate kinase-like domain profile. 1 110 IPR008144 -
Ssu7g2813 199 Coils Coil 66 86 - -
Ssu7g2813 199 SMART gk_7 2 113 IPR008145 -
Ssu7g2813 199 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 17 143 - -
Ssu7g2813 199 Pfam Guanylate kinase 17 109 IPR008145 -
Ssu7g2813 199 PANTHER GUANYLATE KINASE-RELATED 17 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2813 Ssu-Chr7 58678323 58680213 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2813 K00942 - gmx:100809808 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2813 7 58678323 58680213 Ssu7g2813 7 58678323 58680213 ECH
Ssu4g1474 4 24578499 24580813 Ssu7g2813 7 58678323 58680213 PCT