Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2800 ATGGCTGCAGCTGTGGTTGTTCCATTGGGCCTCCTCTTCTTCGCTTCCGGCCTCATCGTTAACCTCATTCAGGCAATATGCTACGTGGTTGTGCGGCCAGTGTCGAAGAATTTGTACAGACGGATGAACAGGGTGGTGGCGGAACTGCTGTGGTTGGAACTCGTGTGGATTATTGATTGGTGGGCTGGTGTTCAGGTCCAAGTATTCACAGATCGTGAAACCTTTCGTTCAATGGGTAAAGAGCATGCTCTTGTCATATCCAATCACAAAAGTGATATTGATTGGCTTGTTGGATGGGTTTTAGCTCAGcGTTCAGGTTGCCTTGGCAGCACTCTTGCTGTGATGAAGAAATCATCAAAGTTTCTGCCGGTTATTGGTTGGTCAATGTGGTTTTCTGAATATCTTTTCCTGGAGAGAAGTTGGGCCAAGGATGAAAGCACATTAAAGTCAGGCCTACAGCAACTGAGGGATTTCCCTCTTCCCTTTTGGTTGGCTCTCTTTGTAGAAGGAACACGCTTTACACAGGCCAAACTATTAGCTGCTCAGGAGTATGCAGCCTCAGCTGGATTTCCTGTTCCTAGAAATGTTTTGATTCCAAGAACTAAGGGTTTTGTTTCAGCAGTAAATCATATGCGCACATTTGTTCCTGCCATTTATGATGTAACAGTGGCAATTCCCAAGAGTTCACCAGCTCCGACAATGCTAAGACTCTTCAGAGGGAAATCTTCAGTGGTGCATGTGCATATTAAGCGGCATTTGATGAAGGATTTGCCAGAAGAAGATGAAGCTGTTGCTCAATGGTGTCGAGATTTATTTGTGGCTAAGGATTCATTGCTTGACAAACATATAGCTGAGGACACATTTAGTGATCAAGAGCTGCAGGATACTGGTCGACCCATAAAGTCTCTTGTGGTTGTCGTATCTTGGGCTTGTGTGGTTGTTGCGGGTGCTGTAAAGTTCCTCCAATGGTCTTCACTACTATCCTCCTGGAAGGGTGTTGCATTTTCAGCATTTGGTTTAGCAGTTGTTACTATCCTCATGCACATCTTGATTAAGTTCTCACAATCTGAGCGTTCAACCCCTTCCAAGGTTGCCCCTGCAAAGTCCAAGAATAGGGAACAGCTGGAGGCTAGGGATAGCAAACAAGACTAG 1152 0.454 MAAAVVVPLGLLFFASGLIVNLIQAICYVVVRPVSKNLYRRMNRVVAELLWLELVWIIDWWAGVQVQVFTDRETFRSMGKEHALVISNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLKSGLQQLRDFPLPFWLALFVEGTRFTQAKLLAAQEYAASAGFPVPRNVLIPRTKGFVSAVNHMRTFVPAIYDVTVAIPKSSPAPTMLRLFRGKSSVVHVHIKRHLMKDLPEEDEAVAQWCRDLFVAKDSLLDKHIAEDTFSDQELQDTGRPIKSLVVVVSWACVVVAGAVKFLQWSSLLSSWKGVAFSAFGLAVVTILMHILIKFSQSERSTPSKVAPAKSKNREQLEARDSKQD 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2800 383 Pfam Acyltransferase C-terminus 236 309 IPR032098 -
Ssu7g2800 383 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 62 236 - -
Ssu7g2800 383 MobiDBLite consensus disorder prediction 369 383 - -
Ssu7g2800 383 MobiDBLite consensus disorder prediction 357 383 - -
Ssu7g2800 383 SMART plsc_2 83 205 IPR002123 GO:0016746
Ssu7g2800 383 CDD LPLAT_LCLAT1-like 55 250 - -
Ssu7g2800 383 Pfam Acyltransferase 72 225 IPR002123 GO:0016746
Ssu7g2800 383 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 373 - -
Ssu7g2800 383 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 1 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2800 Ssu-Chr7 58292360 58308399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2800 1 382 Miscellaneous Gene Families AT3G57650 75.131 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2800 K13523 - gmx:100814107 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1460 4 24316730 24326354 Ssu7g2800 7 58292360 58308399 PCT