Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2774 ATGGGTTGGAATCTCCTCTTCTGGCTCGTCATTTGTTTCCCTGCCAACATTGCCCTTCTCGCCTCAACTTTCTACCAGGTTTTGATCCTATCTGATTTGGAAGCTGATTATATCAACCCATTTGACGCTTCGTCTCGGATTAACTACTTCATCCTTCCCGAGTTCATTGGGCAGGGAGCCTTGTGTGCCCTCTGCCTCTTCACTGGCCACTGGTTCATGTTTTTGCTCACAGTGCCTGTTACTTGCTATCATGTCATGCTGTATGTGAAAAGAGAGCATCTTCTTGATGTTACTGAAGTGTTTAGGGTACTCAAAGCTGAGAAGAAATTTCGGATAGCCAAACTTGCTTTGTACTTAATGGTTCTCATTGTGACTATCTTCAGGTTTGTCACACCTTTACAATAG 405 0.4395 MGWNLLFWLVICFPANIALLASTFYQVLILSDLEADYINPFDASSRINYFILPEFIGQGALCALCLFTGHWFMFLLTVPVTCYHVMLYVKREHLLDVTEVFRVLKAEKKFRIAKLALYLMVLIVTIFRFVTPLQ 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2774 134 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Ssu7g2774 134 PANTHER CORNICHON-RELATED 2 131 - -
Ssu7g2774 134 PANTHER PROTEIN CORNICHON 2 131 - -
Ssu7g2774 134 SMART Cornichon_2 6 127 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2774 Ssu-Chr7 57574448 57579869 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2774 K20368 - gmx:100819066 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2774 7 57574448 57579869 Ssu7g2774 7 57574448 57579869 ECH
Ssu4g1446 4 24036128 24037842 Ssu7g2774 7 57574448 57579869 PCT