Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1446 ATGGATTTGGATTTGATCTTTTGGCTCGTGATTTGTTTCCCTCTCAACGTTGCCTTTTTAGTCTCATCGTTCTACCAGGTTTTGACTTTGTCTGACTTGGAAGCTGACTTTATCAACCCATATGATGCTTCATCTCGGATTAATTACTTCATCGTTCCTGAGTTTATTGGGCAGGGATTATTGTGCGCTTTCTGCCTTTTTACTGGCCATTGGATCATGTTTTTGATGACGGTTCCTGTTACATGCTATCATGTGATGCTGTACATGAAACGGCAGCATCTCATTGATGTTACTGAAGTGTTTAGGGTACTTAATGCAGAGAAGAAATTTCGGATAGCCAAACTTGCTTATTACTTAACAATCGTCATTATAACTGTCTTCAGGTTTGTTTGTGATGCCCTTAAAATAGCATATGCTTATCTACTGTGCTTTGGGTTCTACATTCTTACTGCTTAA 456 0.3882 MDLDLIFWLVICFPLNVAFLVSSFYQVLTLSDLEADFINPYDASSRINYFIVPEFIGQGLLCAFCLFTGHWIMFLMTVPVTCYHVMLYMKRQHLIDVTEVFRVLNAEKKFRIAKLAYYLTIVIITVFRFVCDALKIAYAYLLCFGFYILTA 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1446 151 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Ssu4g1446 151 PANTHER PROTEIN CORNICHON 3 131 - -
Ssu4g1446 151 PANTHER CORNICHON-RELATED 3 131 - -
Ssu4g1446 151 SMART Cornichon_2 6 127 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1446 Ssu-Chr4 24036128 24037842 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1446 K20368 - gmx:100527262 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1446 4 24036128 24037842 Ssu4g1446 4 24036128 24037842 ECH
Ssu4g1446 4 24036128 24037842 Ssu7g2774 7 57574448 57579869 PCT