Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2742 ATGGGAGGTGGTGGCCGAAGCTCTTCTCCTATTAAGCAGAGGAATTCAAGGGATGGTTCTATGAAGCGTGTTCCACATGCAAAACCACCATTTAGTCTTAGTCAAGTGAAGAAGGCAATTCCACCTCACTGTTTTAACCGTTCTGTGATTCGTTCATTTTCCTATGTTTTCTATGACCTTACCATAGCCTCATGCCTAGCCTATGTCGCggtaaattacttttatacCCTTCCCCATAACCTCTCCCTCATGGCATGGCCCCTTTATTGGGCCGTCCAAGGTTGCGTCCTAACCGGGGTTTGGGTCATTGCACACGAGTGTGGCCATCACGCATTCAGTGATTACCAATGGCTTGATGACTCAGTTGGCCTTGTTCTCCATTCACTTCTACTTGTGCCTTATTTTTCGTGGAAATATAGCCATCGCCGGCACCACTCCAACACGGGTTCCCTTGAACGTGATGAAGTGTTTGTGCCAAAGACAAAGTCTGGTATCTCTTGGTATTCGAAGTACCTTAACAACCCACCAGGGAGAGTTCTCACACTTGCTATCACTCTAACTCTAGGTTGGCCTCTCTACTTGGCTTTCAATGTTTCGGGAAGGTCCTATGAGAGATTCGCATGCCACTATGACCCTTATGGCCCCATTTATTCGGACCGTGAGAGGCTTCAAATTTATGTATCCGATGCTGGGATTCTTGCGGTGTGTTATGGGCTCTACAAGCTTGTTCTGGCAAAGGGTCTAGCTTGGGTGGTTTGTGTTTATGGGGTGCCGTTGCTAGTGGTTAATGGGTTTTTGGTGTTGATCACTTTTTTGCAACACACTCACCCTGCGGTTCCTCACTATGATTCCTCGGAGTGGGATTGGTTGAGAGGGGCGTTGGCCACCGTGGACAGAGATTATGGGATTTTGAACAAGGTTTTTCATAATATCACGGACACACATGTGGCGCATCACTTGTTTTCCACAATGCCGCATTATCATGCAATGGAGGCTACTAAGGCTATAAAACCGATTTTGGGAGAGTACTATCACTTTGATGGGACTCCTATTTATAAGGCAATGTGGAGGGAGGTAAAGGAGTGCATGTATGTTGAGCCTGATGAAGGGTCTAAGGGCAAAGGTGTTTACTGGTACAAAAATAATCTGTAA 1152 0.4592 MGGGGRSSSPIKQRNSRDGSMKRVPHAKPPFSLSQVKKAIPPHCFNRSVIRSFSYVFYDLTIASCLAYVAVNYFYTLPHNLSLMAWPLYWAVQGCVLTGVWVIAHECGHHAFSDYQWLDDSVGLVLHSLLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKTKSGISWYSKYLNNPPGRVLTLAITLTLGWPLYLAFNVSGRSYERFACHYDPYGPIYSDRERLQIYVSDAGILAVCYGLYKLVLAKGLAWVVCVYGVPLLVVNGFLVLITFLQHTHPAVPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYHFDGTPIYKAMWREVKECMYVEPDEGSKGKGVYWYKNNL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2742 383 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 1 383 - -
Ssu7g2742 383 MobiDBLite consensus disorder prediction 1 28 - -
Ssu7g2742 383 CDD Delta12-FADS-like 47 329 - -
Ssu7g2742 383 PANTHER OLEATE HYDROXYLASE FAH12 1 383 - -
Ssu7g2742 383 Pfam Domain of unknown function (DUF3474) 20 67 IPR021863 GO:0016717
Ssu7g2742 383 Pfam Fatty acid desaturase 85 345 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2742 Ssu-Chr7 56174805 56175956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2742 1 383 Lipid Metabolism Gene Families AT3G12120 74.935 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2742 K10256 - gmx:100780912 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2742 7 56174805 56175956 Ssu7g2742 7 56174805 56175956 ECH
Ssu4g1411 4 23468425 23469636 Ssu7g2742 7 56174805 56175956 PCT