Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2735 ATGGATTCTTCTTCTGATCACTCTTCCGCATCATCACTTCATTCTCCTGGAGATGTTCAAAACGTTAAGTTCTGTCAGTGGTGTGGTGGTCCAACAAAGCATGAAATACCTGAAGGAGAAGAAAGGTTGAGAGCTGTATGTGCAAGTTGTGGGAAGATTGCCTATCAGAATCCAAAAATGGTAGTTGGTTGCCTCATTGAGCATGATAACAAGGTCCTCCTTTGCAAGCGGAAGATTGAACCATCTTATGGTCTATGGACGCTTCCTGCTGGTTATTTGGAAATTGGAGAGTCGGCTATGGAAGGTGCCATTAGGGAAACGAGGGAGGAAGCCAATGCTGATGTTGAAGTGATTTCTCCCTTTGCTCAATTGGATATTCCTTTAATAGGCCAAACTTATATAATATTCTTAGCAAGGCTGAAGAAGCCCCACTTCTCACCTGGTCCAGAATCATCAGAATGCCAGCTTTTCTCACTCAATGAAATACCTTTCACTTCTCTATCTTTTTCGTCAATGGTGGTTACTTTAAGCATGTATGTTGAGGACATGAAGGCGGGAGGAAAGCCCAAATTCCATTATGGTACCATTAACAAAAGGCCTGGTACTAGTCCTTCTGATATTCATGCCTATACTCTGGATCATCATATACAATTATGA 657 0.4201 MDSSSDHSSASSLHSPGDVQNVKFCQWCGGPTKHEIPEGEERLRAVCASCGKIAYQNPKMVVGCLIEHDNKVLLCKRKIEPSYGLWTLPAGYLEIGESAMEGAIRETREEANADVEVISPFAQLDIPLIGQTYIIFLARLKKPHFSPGPESSECQLFSLNEIPFTSLSFSSMVVTLSMYVEDMKAGGKPKFHYGTINKRPGTSPSDIHAYTLDHHIQL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2735 218 Gene3D - 20 56 - -
Ssu7g2735 218 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 57 209 - -
Ssu7g2735 218 PANTHER BNAA03G19740D PROTEIN 10 217 - -
Ssu7g2735 218 ProSitePatterns Nudix box signature. 91 112 IPR020084 GO:0016787
Ssu7g2735 218 ProSiteProfiles Nudix hydrolase domain profile. 57 180 IPR000086 -
Ssu7g2735 218 PANTHER NUDIX HYDROLASE 23 10 217 - -
Ssu7g2735 218 SUPERFAMILY Nudix 23 184 IPR015797 -
Ssu7g2735 218 Pfam Nudix N-terminal 23 56 IPR029401 -
Ssu7g2735 218 Pfam NUDIX domain 61 162 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2735 Ssu-Chr7 55981745 55985624 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2735 K18453 - gmx:100777180 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2735 7 55981745 55985624 Ssu7g2735 7 55981745 55985624 ECH
Ssu4g1405 4 23394369 23396903 Ssu7g2735 7 55981745 55985624 PCT