Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2729 ATGGCTGATGCAACCAAGTACATTCCCATAGGGGGAACCCTCAACTCAGACCTCAAGAGCCTCTTCTCCATACTCAAAACCAGAAAAACACTCCCTCTTGCCTATGCTTTTATGTTCACCTTTGTTGCTTTCACAGTTTTCCTAGCCTTTTGCCCCTCCCCAAACACTTCCTCTCCCTGGTTTACCAACGTATTCACCTCCACTGCCACCGCCACTTCCTCTGCCAGTTCCTACAAGTCCCAACTctcttccattttctctttcttctttcacaaCACAACTTCATCATCAAATTCCTCATCACCCTCTTTCCCTCCTAGTGCCACCCGTGATAGTACCAACACTTCTAGATCTAGCAACAACACTTCTCCTTCTCCTCAAACAAGTGCAAAGACATTCAAAACCACCCCTTTTGAAAACCAAACTCAAGCTTCTCCAACTACAAACAAGATACCAAGTAATCACACAGCAAAACCGCCTGCTCATGTTGTGAGTAAGGAACCATCAAGTGGTAACAATCATACCCAAGTTTCCAGAACTTCTGATGAGGCTAAAACTCTGAAGAAGACAAATCAATCTTCCAATGGTGTTGCCTCTGCACCTAAAGTTTCAGGGGCAAGTCCCAATCAGAATTTGAGTTCTTCGGTGAAAGGAGGGGACACAGAGAAGGGTGTTGTGCGTAGAAATCACACGGCTTCCCTGGCGAAGGAACAGAACAATGGGAATGATGACAAGGATTCAAGGGTGAACGATGAAGTGATGGAATCTTTGatcaagtgtaatttttttgatgGGGAATGGGTCAAGGATGATTCATATCCTCTCTATGAACCTGGTTCTTGCAATCTGATCGATGAACAGTTCAACTGTATCCAAAATGGAAGGCCTGATAAAGACTATCAGAAATATAAGTGGAAGCCAAAGGGATGCAGCCTCCCAAGGTTGGATGGACATCGAATGCTGGATTTGTTGAGAGGAAAAAGGCTTGTTTTTGTTGGTGATTCCATCAATAGGAATATGTGGGAATCTCTAATTTGCATCCTGAGAAACGCAGTGAAAGACAAAAGCAATGTCTATGAAGCAGATGGAAGAGTCCATTTCAGAGGGGAAGCCTCTTATTCATTCGTATTCAAAGATTATAACTTCTCCGTGGAGCTTTTTGTATCCCCATTCTTAGTTCAGGAATGGGAAGTTCAAGTCAAGAATGAAACGAAGAAGGAAACACTTCGTCTGGATTTAGTTGGTAAATCTTCAGATCAATATAAAAATGCAGATATAATCATCTTCAACACTGGTCATTGGTGGactcatgataaaacttctaAAGGGAAGGACTATTACCAAGAGGGTAGCCACGTCTATGATGAATTGAATGTTTTGGAGGCGTTCCGAAGGGCTATAACAACTTGGAGCAGATGGATTGATGCCAACATAGATCCATCCAAATCTATGATCTTCTTCAGAGGCTATTCTGCTTCACATTTCAGTGGGGGGCAATGGAATTCTGGTGGACAATGTGACAGTGAAACTGTGCCTATCAAGAATGAGAAATACTTGAAGGAATACCCCCCTAAGATGAGGGTATTGGAAAAGGTTTTGAAGTATATGAAAACCCGTGTCACCTACATGAATGTCACTAAAATGACAGATTTCCGGAAGGATGGTCATCCCTCCAGATATAGGAAGCAAAACCTATCATCAGAGGAGAGGAAATCACCATTGAGGTACCAAGACTGCAGTCACTGGTGCCTCCCTGGTGTTCCTGATGCATGGAATGAAATTCTATATGCTGAGCTTCTGTTGAAACAATATCAGAATCAGCATCAGCAAAAGAGACCATAG 1842 0.4159 MADATKYIPIGGTLNSDLKSLFSILKTRKTLPLAYAFMFTFVAFTVFLAFCPSPNTSSPWFTNVFTSTATATSSASSYKSQLSSIFSFFFHNTTSSSNSSSPSFPPSATRDSTNTSRSSNNTSPSPQTSAKTFKTTPFENQTQASPTTNKIPSNHTAKPPAHVVSKEPSSGNNHTQVSRTSDEAKTLKKTNQSSNGVASAPKVSGASPNQNLSSSVKGGDTEKGVVRRNHTASLAKEQNNGNDDKDSRVNDEVMESLIKCNFFDGEWVKDDSYPLYEPGSCNLIDEQFNCIQNGRPDKDYQKYKWKPKGCSLPRLDGHRMLDLLRGKRLVFVGDSINRNMWESLICILRNAVKDKSNVYEADGRVHFRGEASYSFVFKDYNFSVELFVSPFLVQEWEVQVKNETKKETLRLDLVGKSSDQYKNADIIIFNTGHWWTHDKTSKGKDYYQEGSHVYDELNVLEAFRRAITTWSRWIDANIDPSKSMIFFRGYSASHFSGGQWNSGGQCDSETVPIKNEKYLKEYPPKMRVLEKVLKYMKTRVTYMNVTKMTDFRKDGHPSRYRKQNLSSEERKSPLRYQDCSHWCLPGVPDAWNEILYAELLLKQYQNQHQQKRP 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2729 613 MobiDBLite consensus disorder prediction 187 218 - -
Ssu7g2729 613 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 18 606 - -
Ssu7g2729 613 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 18 606 IPR029962 GO:0016413
Ssu7g2729 613 MobiDBLite consensus disorder prediction 95 225 - -
Ssu7g2729 613 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 312 597 IPR026057 GO:0016740
Ssu7g2729 613 MobiDBLite consensus disorder prediction 166 180 - -
Ssu7g2729 613 MobiDBLite consensus disorder prediction 95 155 - -
Ssu7g2729 613 Pfam PMR5 N terminal Domain 259 310 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2729 Ssu-Chr7 55544552 55547734 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2729 - - pvu:PHAVU_007G261000g 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2729 7 55544552 55547734 Ssu7g2729 7 55544552 55547734 ECH
Ssu4g1395 4 23208030 23210633 Ssu7g2729 7 55544552 55547734 PCT