Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2725 ATGGGGCACGTGCAAGGGAGCGGGAAAGAGAAGCTGCTTTATCCTGATGCCTGTGGTGGGGGAGGCCGTGGTTGGATAAGCCAAGGAATTGTGAGTTATGGCAGAGGGCATGGGACAAGGGAAACCTGTGCCCTGCACACTGCCAGACTTTCATGTGATACGCTGGTGGATTTTTGGTCAGCACTGGGAGAGGAGACGAGGCAATCTCTTCTAAGGATGAAGGAAGAAGACTTTATTGAGAGACTCATGTACAGGTTCGATAGCAAGAGATTTTGCAGAGATTGTAGAAGAAATGTTATTCGAGAATTCAAGGAACTAAAGGAATTGAAGCGCATGCGAAGAGAACCTTGTTGCACCAGCTGGTTTTGTGTTGCTGATACTGCCTTTCAGTATGAGGTATCTGATGACTCAATTCAAGCAGATTGGCGCCAGACATTTGCGGATACTGTGGGATCGTATCACCACTTTGAGTGGGCTGTGGGGACAACTGAAGGAAAATCTGACATTTTGGAATTTGAAAATGTTGGAATGAATGGATGTGTACAAGTCAGTGGCCTAGATCTTGGTGGTTTGAGTGCATGCTTCATCAACCTCCGAGCTTGGAAGCTAGATGGACTGCTGCTAATTGTAGGGGATGGTTTTGTTACAATTACAAAAGGGGAAAGTATCAGAAGATTCTTTGAGCATGCTGAAGAGGCAGAAGAAGAAGAGgatgatgatttgatggacgAAGATGGAAATGAACTTGATGGAGAATGCTCCCGTCCTCAAAAGCATGCAAAGAGTCCCGAACTTGCTCGAGAGTTTCTTCTAGATGCTGCTACTGTTATATTTAAAGAACAGGTTGAAAAGGCTTTCAGAGAAGGAACAGCACGCCAAAATGCGCACAGCATATTCGTTTGTCTTGCACTGAAACTGTTGGAAGAACGAGTTCACATAGCATGCAAAGAAATCATTACATTAGAAAAGCAGATGAAACttcttgaagaagaagaaaaagaaaaacgtgAAGAAGAAGAACGGAAGGAGAGGAAAAGGAcaaaagaaagggagaaaaaacTTAGGAGAAAGGAAAGACTaaaaggaaaggagaaagaCACAGAAAGAAAGTGTTCTGAATCAATTGATGTTCCTGGATCTCCTGAAGTCTCAAAGGAAGAATTGTCTCCTGCTGCTGATGTAGAGCAAAATAATTCTATTACAGGCAGGAATTCAGTCAATGTAACAGAGGGTGATTATCCTAAAATCCAACATGAAGACTTCTCTAGAGAGTGTAGTACTTTGAGAACACAAGACTGCTCTTATGATGACTGTGACGGAGACATTGCAAATGCACAACACCACTCTTATGATGATTGTGATGGAGACACTGCAAATGCACAAGACAGGAATAGTACTTCTACAGTTGAGCAATCAAAGTTTTACTGTCAAAGATTTAGATTTAGGAAAGAATTTCGACTGGATGCGCTAACAAAGTGGTCTGACAGACGCCATAATGCAATTGTTTCAGAAAATGGTGTGACAGTTGGAAGATCGGAGCCAATACACTATGAAGATAATTTTGGGATGTCTTCCAGGGGAATCAATGCATTGAACAGGAAATCTAGAATAAATGTTGCAAAATCCAATGGTCGAAATATTGGTCATAAGTGTAGTGAGAAGTTTTATACTTCCAACAGCTGGATGAATGACAGATATGATTTCCATTCATGCATTTGTAGCctgaataataaaatgaatagaGTTAGCTGGGAGACAAAACCTGCTAGTAAGTCTGAATCCACAGTAGATACATCTAAGCAATATTATCGTGGTAGCAAGTATAATCATGTAGACTTCATGCATGAGAGTAATGGAAGAACCAAAAGCAAAGTCATCTCAGGGAACTATTCCAGTAGGGATTTGCCTCAATCAAAGAAAGTTTGGGAGCCTATGGAGTCACACAAGAAATATGCTCGTAGTAATTCAGACTCTGATGTTACATTGGGGTCCACAGGTCAAGGATTTCAGTTCGATATGGTAAGGTTGTCTGTTGATGAAGTTGGTGGTTCAGGTGAAATTGATGATGGGGATAGTAACTTGAAAAGAAGCAGAATGGGTGAAGGCTGTCAGAATGATCTTGATGCAGAAGCTGGAGGATCATGCAGCTCCACAGAAATTGCGTCTGAGGAACCTGGAATGTGTCTGATGGGCAGCTCTGCCTTGAATAATTCTTCCAATCCCAATCAAGGTAGCACTTCTAGTTCTGATAACTGCTCATCATGCCTAAGTGAGGGTGATAATAACACCACCTCTTCAAACCGTGAAATTACAGAATCCTCAACATCGGATTCAGAAGATGCTAGCCAACAATGTGAAGTAAGAGATAGTTCAACTTGCATTGACCATGGCTTGTCTGGCTCTCATGAAGCTGGGGTGGAGAAAATCCATAATGCAAATGACGAGGGTTTGATTATCAGGTCACCAGTTTGGTCCATCCTTGGATGTAGCAAGAGGTGA 2499 0.4058 MGHVQGSGKEKLLYPDACGGGGRGWISQGIVSYGRGHGTRETCALHTARLSCDTLVDFWSALGEETRQSLLRMKEEDFIERLMYRFDSKRFCRDCRRNVIREFKELKELKRMRREPCCTSWFCVADTAFQYEVSDDSIQADWRQTFADTVGSYHHFEWAVGTTEGKSDILEFENVGMNGCVQVSGLDLGGLSACFINLRAWKLDGLLLIVGDGFVTITKGESIRRFFEHAEEAEEEEDDDLMDEDGNELDGECSRPQKHAKSPELAREFLLDAATVIFKEQVEKAFREGTARQNAHSIFVCLALKLLEERVHIACKEIITLEKQMKLLEEEEKEKREEEERKERKRTKEREKKLRRKERLKGKEKDTERKCSESIDVPGSPEVSKEELSPAADVEQNNSITGRNSVNVTEGDYPKIQHEDFSRECSTLRTQDCSYDDCDGDIANAQHHSYDDCDGDTANAQDRNSTSTVEQSKFYCQRFRFRKEFRLDALTKWSDRRHNAIVSENGVTVGRSEPIHYEDNFGMSSRGINALNRKSRINVAKSNGRNIGHKCSEKFYTSNSWMNDRYDFHSCICSLNNKMNRVSWETKPASKSESTVDTSKQYYRGSKYNHVDFMHESNGRTKSKVISGNYSSRDLPQSKKVWEPMESHKKYARSNSDSDVTLGSTGQGFQFDMVRLSVDEVGGSGEIDDGDSNLKRSRMGEGCQNDLDAEAGGSCSSTEIASEEPGMCLMGSSALNNSSNPNQGSTSSSDNCSSCLSEGDNNTTSSNREITESSTSDSEDASQQCEVRDSSTCIDHGLSGSHEAGVEKIHNANDEGLIIRSPVWSILGCSKR 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2725 832 PANTHER - 10 446 - -
Ssu7g2725 832 MobiDBLite consensus disorder prediction 681 787 - -
Ssu7g2725 832 MobiDBLite consensus disorder prediction 391 410 - -
Ssu7g2725 832 Coils Coil 304 370 - -
Ssu7g2725 832 MobiDBLite consensus disorder prediction 232 247 - -
Ssu7g2725 832 MobiDBLite consensus disorder prediction 330 410 - -
Ssu7g2725 832 MobiDBLite consensus disorder prediction 360 375 - -
Ssu7g2725 832 MobiDBLite consensus disorder prediction 731 787 - -
Ssu7g2725 832 MobiDBLite consensus disorder prediction 330 347 - -
Ssu7g2725 832 PANTHER OS10G0105400 PROTEIN 444 821 - -
Ssu7g2725 832 MobiDBLite consensus disorder prediction 232 260 - -
Ssu7g2725 832 PANTHER OS10G0105400 PROTEIN 10 446 - -
Ssu7g2725 832 PANTHER - 444 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2725 Ssu-Chr7 55391016 55396854 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2725 - - gmx:100776127 1353.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2725 7 55391016 55396854 Ssu7g2725 7 55391016 55396854 ECH
Ssu4g1388 4 23090688 23098282 Ssu7g2725 7 55391016 55396854 PCT