Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1388 ATGCCGGGATTAGCGCAAAGGAATGAACAACTCACTAATGGCTCATCGACGCCGACGTGTTCACTTTCTGCAAACGGATTCTGGTCGAAGAATTCGGACGACCTTAGCTACAATCAGCTTCAGAAGTTCTGGGGTGAGCTGTCACTGCAAGCTCGGCAAAAACTCTTGAGGATAGACAAACAATCCCTTTTTGAGCAAGCTCGTAAAAATATGTACTGCTCCAGGTGCAATGGGTTGCTTCTTGAAGGTTTTCTGCAGATTGCTATGTATGGAAAATCTTTGCAACAGGAAGGGGTGGATGCTCAGTTTCCTTGCAACAGATCTGGGGGTTTGAGAAAGCTAAATAATGATGGATCAAGCATTATCAATGGATGCCAAGATGAAATTCAAGATCCTTCTATCCATCCTTGGGGAGGTCTGACTACAGCACGAGATGGTTCATTAACACTTATGAGCTGCTATTTGTATTCAAAGTCTTTGAAAGGACTGCAAATTGTCTTTGATGGGGCACGTGCCAGGGAGCGGGAAAGAGAACTGCTTTATCCTGATGCCTGTGGTGGGGGAGGCCGTGGTTGGATAAGCCAAGGAATTGTAAGTTATGGCAGAGGACATGGGACAAGAGAAACGTGTGCCCTGCATACTGCCAGACTTTCATGTGATACACTGGTGGATTTTTGGTCAGCACTGGGAGAGGAGACTCGGCTTTCTCTTCTAAGGATGAAGGAAGAAGATTTTATTGAGAGACTTATGTACAGGTTTGATAGCAAGAGATTTTGCAGAGATTgtagaaaaaatgttattcgAGAATTCAAGGAACTAAAAGAACTGAAGCGCATGCGCAGAGAACCTCGTTGCACCAGCTGGTTTTGTGTTGCTGACTCGGCCTTTCAATATGAGGTATCTGATGACTCAGTTCAAGCTGATTGGCATCAGACATTCGCTGACGCTTCGGGAACCTATCATCACTTTGAGTGGGCTGTGGGGACAACTGAAGGAAAATCTGACATTTTGGAATTTGAAAATGTTGGATTGAATGGATGTGTTCAAGCCAGTGGCCTGGATCTTGGTGGTTTGAGTGCATGTTTCATCACCCTCCGAGCTTGGAGAGTAGATGGACGCTATACTGAACTTTCTGTTAAAGCTCATTCGTTGAAGGGTCAACAGTGTGTACATTGCAGGTTAATTGTTGGAGATGGTTATGTTACAATCACAAAAGGGGAAAGTATCAGAAGATTCTTTGAGCATGCGGAAGAGGCTGAGGAAGAAGAGGATGATGATTCGATTGACAAGGATGGGAATGAGCTTGATGGAGAATGCTCCCGTCCCCAAAAGCATGCAAAAAGCCCTGAACTTGCTCGAGAATTTCTGCTAGATGCTGCCACTGTTATTTTCAAAGAACAGGTTGAAAAGGCTTTCAGAGAAGGAACAGCACGCCAAAATGCACACAGCATATTCGTTTGTCTTGCACTAAAACTGCTGGAGGATCGAGTGCATGTAGCATGCAAAGAAATCATTACATTGGAAAAGCAGATGAAACttcttgaagaagaagaaaaggaaaaacgtGAAGAAGAAGAACGCAAGGAGAGGAGAAGAACAAAGGAAAGGGAGAAAAAACTTAGGAGGAAGGAAAgactaaaaggaaaagaaaaagaaaaaagttgttcTGAATTAAATGATGCTCTTGGTTCTCCTGAAATCTCAAAGGAAGAATTGTCTGCAGTTGCTGATATGGAGCAAAATAATCCTATTAGCTGCAGGAATTCAGTTATTGAAACAGATGAAACTAATCTATTGAGGGATGATTCTCCTAACATCCAAGATGAAGAATTCTCTAGTGAGTGTAGTAGTTTGAAACCACAAGACCTCTCTTATGATGATTGtgaggaagaaatttcaaatgcAAAAGACGAGAAGGGTCAGGCTATAATTGAACAATCAATACTTTCTCATCGAAGACTAAGATGTCGGAAAGAATTTCAACTGGATATGCCTATGAAGTGGTCTGACAGACGGCGATATGCAGTTGTTTCAGAAAATAGTTTGATGGTTGGCAGATCTGAGCCAAGACATTATGGAGAGAGTTTTGTGACATCATCCAGGGCAATGAATGGGTTCAATAGGCAATCAAGAATAAATGTTCCAACAAAATCCAATGGTCGAAATGTTGGTCCTCCTAAGCATAATGAGAAGTTCTATAGTTCCAAGAACAGGACAAATGACAGATGTGATATTCATTCTTGCAGTTGTAGCTTGAATAATGAATATAAGACAAGGGTTGAGCAACATTCTCTTATGACTAGAGTTAGTCGGGAGACAAAATCTACTTGTCAGTCTGAATCTGCAGGAGATACATCCAAGCAATTTTATCGTGGAAGTAAGAATCAAGTAGACTATATGCATGAGAGTAGTGGAAGACCCAGAAGCAAAATCATCTTGGGGAACTATCCCAGCAGGGATTTGTTTCAATCGAAGAAAGTTTGGGAGCCTACAGAATCTCAGAAGAAATATCCTCGCAGTAATTCTGGCTCTGATGTTATTTTGAGGTCCACTAAAGTTCAAGGAGCTCAATCTGATCTGATCAAGTCATCTATTGGACAAGCTGTTGATTCAGGTGAAAATGATGATGAGGAATGTAATTCAAAAAGATTTAGTGGAGTGGATGAAAGCTGTCAAAATGGTTTTCACGTAGAAACTGAAGGTTCTTGTAGCTCTACGGAAGTTGCTTTGGAGGAACCTGGGATATGTCCAACTGGAGGCTTTGCCTTAAATAATTCTTCTGATCCCACTCAAAGTAGCACTTTTAGTTCTGATAACTGCTCATCATGCCTAAGTGAGGGTGATAATAATACAACCTCGTCAAACCATGAAAATACTGAATCCTCAACCACATCAGATTCAGAAGATGTTAGCCAGCAATCTGAAGTAAGAAATAATTCGGATTGCATGGAAAATGTCTTGTCTGATTGTCATGAAGTTGCCATAGAGAATAACCGGAATGCAAATGGTGATGGTTTGGCAAGAAGTTCAAGTTCACTGATTGGTCTGTCCTCAGATGGTACAAGAAATGATGCACTGGGGAATCTTGGGGAAATtgcccaaaattttgataattgtttttCCACCACCAACGTATGTTCTCAACCTCAAAGTATGCTTCCACCGGTGTCAAACCAAAATTTACAGTTCCCAGTGTTTCAAGCTCCTTCAACAATGGGTTATTTCCATCAAAATCCAGTTTCATGGCCAGCAGCTCCCACAAATGGATTGATGCCCTTCCCGCACTCAAATCCCTATTTATATGCTGGCCCTCTTGGATATAGCTTAAATGAGGATCCACGTTTCTGCTTGCAGTATGGAGCCTTACAGCAGTCAACACCCTTATTCAACCCTGCTGTTCCAGTTTATCAGCCAGTTGTCAGAGCTAATGTCTTAAATGCAGATGAACGGACTCGAGTTTCCCAGCCAGCTTCTTTGCTAGATCATCTCAATGGATCTTTCGCAGAAAGGGCCGTTCCAGCTGGAGCTATTTCCAAAAGACCAGCATCATATGGACAAGTTTGGCGTGATAAATCTGCCAAGTCACTAGAGAAtaacaatgatttttccttGTTTCATTTTGGTGGACCTGTAGCCCTTTCAACAGGTTGTAAATCAGCACACGCATCTTTGAATGCTGATACTGTTGGGGATTTTAGCTCTAAAAGTTCAGCAGATCGTGTCGAAAAGGTCCGTAATTGCAATAAGAAAGAGACTCCTGCCATGGAGGAATACAACTTGTTTGCAACAAGTAATAACTTAAggttttcaattttctaa 3819 0.4048 MPGLAQRNEQLTNGSSTPTCSLSANGFWSKNSDDLSYNQLQKFWGELSLQARQKLLRIDKQSLFEQARKNMYCSRCNGLLLEGFLQIAMYGKSLQQEGVDAQFPCNRSGGLRKLNNDGSSIINGCQDEIQDPSIHPWGGLTTARDGSLTLMSCYLYSKSLKGLQIVFDGARARERERELLYPDACGGGGRGWISQGIVSYGRGHGTRETCALHTARLSCDTLVDFWSALGEETRLSLLRMKEEDFIERLMYRFDSKRFCRDCRKNVIREFKELKELKRMRREPRCTSWFCVADSAFQYEVSDDSVQADWHQTFADASGTYHHFEWAVGTTEGKSDILEFENVGLNGCVQASGLDLGGLSACFITLRAWRVDGRYTELSVKAHSLKGQQCVHCRLIVGDGYVTITKGESIRRFFEHAEEAEEEEDDDSIDKDGNELDGECSRPQKHAKSPELAREFLLDAATVIFKEQVEKAFREGTARQNAHSIFVCLALKLLEDRVHVACKEIITLEKQMKLLEEEEKEKREEEERKERRRTKEREKKLRRKERLKGKEKEKSCSELNDALGSPEISKEELSAVADMEQNNPISCRNSVIETDETNLLRDDSPNIQDEEFSSECSSLKPQDLSYDDCEEEISNAKDEKGQAIIEQSILSHRRLRCRKEFQLDMPMKWSDRRRYAVVSENSLMVGRSEPRHYGESFVTSSRAMNGFNRQSRINVPTKSNGRNVGPPKHNEKFYSSKNRTNDRCDIHSCSCSLNNEYKTRVEQHSLMTRVSRETKSTCQSESAGDTSKQFYRGSKNQVDYMHESSGRPRSKIILGNYPSRDLFQSKKVWEPTESQKKYPRSNSGSDVILRSTKVQGAQSDLIKSSIGQAVDSGENDDEECNSKRFSGVDESCQNGFHVETEGSCSSTEVALEEPGICPTGGFALNNSSDPTQSSTFSSDNCSSCLSEGDNNTTSSNHENTESSTTSDSEDVSQQSEVRNNSDCMENVLSDCHEVAIENNRNANGDGLARSSSSLIGLSSDGTRNDALGNLGEIAQNFDNCFSTTNVCSQPQSMLPPVSNQNLQFPVFQAPSTMGYFHQNPVSWPAAPTNGLMPFPHSNPYLYAGPLGYSLNEDPRFCLQYGALQQSTPLFNPAVPVYQPVVRANVLNADERTRVSQPASLLDHLNGSFAERAVPAGAISKRPASYGQVWRDKSAKSLENNNDFSLFHFGGPVALSTGCKSAHASLNADTVGDFSSKSSADRVEKVRNCNKKETPAMEEYNLFATSNNLRFSIF 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1388 1272 MobiDBLite consensus disorder prediction 516 533 - -
Ssu4g1388 1272 MobiDBLite consensus disorder prediction 769 792 - -
Ssu4g1388 1272 PANTHER OS10G0105400 PROTEIN 1 1272 - -
Ssu4g1388 1272 PANTHER - 1 1272 - -
Ssu4g1388 1272 MobiDBLite consensus disorder prediction 433 447 - -
Ssu4g1388 1272 MobiDBLite consensus disorder prediction 417 447 - -
Ssu4g1388 1272 Coils Coil 490 543 - -
Ssu4g1388 1272 Coils Coil 625 645 - -
Ssu4g1388 1272 MobiDBLite consensus disorder prediction 946 978 - -
Ssu4g1388 1272 MobiDBLite consensus disorder prediction 516 561 - -
Ssu4g1388 1272 MobiDBLite consensus disorder prediction 711 735 - -
Ssu4g1388 1272 MobiDBLite consensus disorder prediction 418 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1388 Ssu-Chr4 23090688 23098282 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1388 - - gmx:100813046 2169.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1388 4 23090688 23098282 Ssu4g1388 4 23090688 23098282 ECH
Ssu4g1388 4 23090688 23098282 Ssu7g2725 7 55391016 55396854 PCT