Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2723 ATGGCATCAAAAAGAAGCGCGAAGTCGAAGGGATTGGGATTGAGCGGCTCCAAAGCTGCAAATTCGCCGTCGTCTTCGACGACGTCGTCGTGCAAACAGTTTCTAGAAACTTCCGTGGATGGTCTGAGCTCGCCTGCGTCTTCGTCAGCTCGGAGCAAAACGCCGTATTCTTTTTCGGAAAGCGTGCCGTTGGACTCGAAGGAAAATGTGACCGTTACGGTGCGGTTTCGTCCTCTGAATCCCAGGGAGATTCGTCAGGGAGAGGAGATAGCGTGGTATGCTGATGGAGAAAGCGTGGTGCGAAACGAGTATAACCCGTCCCTAGCGTATGCTTACGACCGTGTCTTTGGTCCCACAACTACAACTCACCAGGTCTATGATGTTGCTGCTCAACATATTATTAGTGGTGCTATGGAGGGCATCAATGGTACAATATTTGCATATGGGGTAACAAGCAGTGGGAAGACTCATACAATGCATGGTGATCAAAGATCTCCAGGAATTATACCTCTTGCTGTGAAGGATGCTTTTAGCATTATCCAAGAGACTCCGAACAGAGagtttcttcttcaagtttcatACTTGGAGATCTACAATGAGgTTGTTAATGACTTATTAAATCCAGCTGGACAGAACTTAAGAATCAGAGAGGATGCTCAGGGAACCTTTGTTGAGGGAATAAAGGAAGAGGTTGTACTCTCCCCTGCTCATGCACTGTCCCTTATAGCAGCCGGAGAAGAGCACAGACATGTCGGGTCCACAAACTTCAACCTACTCAGCAGCAGGAGCCATACAATATTTTCGCTGACTATAGAGAGTAGTCCATGTGGTGAAAATAGTGAAGGAGAAGCAGTAACACTGTCTCAACTGAACCTCATCGATCTGGCAGGTTCTGAGAGCTCAAGGGCTGAAACAACTGGCATGCGAAGGAGAGAAGGATCTTACATCAATAAAAGTCTTCTAACTCTTGGAACTgttatttcaaaattgacgGAAGGCAGAGCTAGTCACATACCTTATAGGGACTCCAAATTGACTAGACTACTTCAGTCTTCGCTCAGTGGTCATGGACGTATATCTCTCATTTGTACAGTAACACCTTCATCAAGTAATGCTGAAGAGACACATAATACGTTGAAGTTTGCCCgccgggcaaagcacattgaaatacaGGCAGCCCAGAACAGGATAATTGATGAAAAGTCAATTATCAAGAAATACCAACATGAGATTCAGTGCTTAAAGGAAGAATTGGAACAAATGAAGCGGGGTATTGTCTCAGTTCAGCCAAAAGAAACTGGCGAAGTTGACTTTGTGCTCCTGAAACAAAAGCTAGAAGATGGCCAAGTCAAGTTGCAGTCAAGattggaagaagaagaagaagctaaagCTGCTTTATTAGGAAGAATTCAACGGTTGACTAAGTTAATTTTGGTCTCCACTAAAGCTTCACACTCAACTAGATTTTCTAACCGTCCTGGTCCTCGTAGAAGACATTCCTTTGGGGAAGAAGAGTTGGCATACCTTCCATACAAAAGGAGGGATTTAATCTCAGATGATGAAAATACTGATCTGCATGTTAATTTAGAGGGAAATGCTGAAACAGCTGGTGATTCTTTTAAGGAggagaaaaaaacaaagaaacacgGGCTACTAAATTGGTTGAAGATACGGaAACGAGATACTGGGTTAAGTGCCTTTTCAGGCACTAATGATAAATCATGTGGAGCAAAATTTGTTAGCACACCTTCTACTCCTCAAGCAGAAACTGGTAATCATGCGGAGTCCAGACATTTCCATTCTCTACCTGCACAAAGCTCTACATCAGCGGATCTTGTATCAGCGGCAAGAGAGGATAAAGAAGTTCATGAGGATAGTTTATTGGGACAAGAGACACCTTTGaTAAGCGTTAAATCAATTGATGAGATTGATCTTTTGAGGGAGCAACAAAAGATTCTGTCAGGAGAAATGGCTCTTCATTCAAGTGCTTTGAAGAGATTGTCTCAGGAAGCTGCAAGAAATCCTCAGAAGGATCAGATTCATGTGGAGATGGAAAGGTTGAAAGATGAAATTAAGGCTAAGAAGGAACAGATAGATTTGCTGGAAAAGCAGATTGCTGATTCTTTCATTGCCTCGGATAAGTTGGATGAATCAGGAGTATCACTAACTCTCACCGAGCTGATGacacaattaaatgaaaaatcttTTGAACTGGAGGTCAAAACAGCAGATAACCATATCATTCAACAACAGCTTAATCAGAAGATCCATGAATGTGAAAGCCTTCAAGAAACAATTGACTCTCTGAAACAGCAGCTTGCAGATGCGTTAGAGGTGAGAAACTTGAGGCCTGTATTCAATCATTCTCCACATTTCTCTGTAACCAAAGACTACCATGGTGAACCTCTCCTTGACGAGGAAAGTGCCATGATAACCAATACCAATGGAAAGATTCATTTGCAAGAGcagGCGAGCGAGATAAAAGGGCTGAAGCTAAAGTTGGCGGAACTAACTGAATCAAAAGAACAGCTAGAACTTCGGAATCAGAAACTGGCAGAAGAGAGTTCATATGCTAAAGGGCTAGCTTCAGCTGCTGCGGTTGAGCTTAAGGCATTGTCAGAAGAAGTTGTCAAACTCATGAACCAGAATGAGAGATTATTGGCTGAGCTGGCAGCATTGAAGAATTCTCCCGCCCAACGTAGTAGTGGAACTGGAACAATCCGAAATGGACGAAGAGAAAGTCACGTTAGACGAAATGATCATGGTGGGTCAAACTCTGATATCAAGAGAGAACTGGCCTTGAGTAAAGAAAGGGAACTTTTATACGAAGCTGCTCTTTTAGATAGGGATCACAAAGAGGCTGAGCTTCAAAGGAAGGTTGAAGAATCAAAGCAAAGAGAAGCATACTTGGAAAATGAACTTGCCAACATGTGGATTCTTGTAGCAAAGCTAAAGAAGTCACAGGGAGCTGAAACTGATGTTTGA 2985 0.4137 MASKRSAKSKGLGLSGSKAANSPSSSTTSSCKQFLETSVDGLSSPASSSARSKTPYSFSESVPLDSKENVTVTVRFRPLNPREIRQGEEIAWYADGESVVRNEYNPSLAYAYDRVFGPTTTTHQVYDVAAQHIISGAMEGINGTIFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQETPNREFLLQVSYLEIYNEVVNDLLNPAGQNLRIREDAQGTFVEGIKEEVVLSPAHALSLIAAGEEHRHVGSTNFNLLSSRSHTIFSLTIESSPCGENSEGEAVTLSQLNLIDLAGSESSRAETTGMRRREGSYINKSLLTLGTVISKLTEGRASHIPYRDSKLTRLLQSSLSGHGRISLICTVTPSSSNAEETHNTLKFARRAKHIEIQAAQNRIIDEKSIIKKYQHEIQCLKEELEQMKRGIVSVQPKETGEVDFVLLKQKLEDGQVKLQSRLEEEEEAKAALLGRIQRLTKLILVSTKASHSTRFSNRPGPRRRHSFGEEELAYLPYKRRDLISDDENTDLHVNLEGNAETAGDSFKEEKKTKKHGLLNWLKIRKRDTGLSAFSGTNDKSCGAKFVSTPSTPQAETGNHAESRHFHSLPAQSSTSADLVSAAREDKEVHEDSLLGQETPLISVKSIDEIDLLREQQKILSGEMALHSSALKRLSQEAARNPQKDQIHVEMERLKDEIKAKKEQIDLLEKQIADSFIASDKLDESGVSLTLTELMTQLNEKSFELEVKTADNHIIQQQLNQKIHECESLQETIDSLKQQLADALEVRNLRPVFNHSPHFSVTKDYHGEPLLDEESAMITNTNGKIHLQEQASEIKGLKLKLAELTESKEQLELRNQKLAEESSYAKGLASAAAVELKALSEEVVKLMNQNERLLAELAALKNSPAQRSSGTGTIRNGRRESHVRRNDHGGSNSDIKRELALSKERELLYEAALLDRDHKEAELQRKVEESKQREAYLENELANMWILVAKLKKSQGAETDV 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2723 994 MobiDBLite consensus disorder prediction 910 927 - -
Ssu7g2723 994 MobiDBLite consensus disorder prediction 1 62 - -
Ssu7g2723 994 CDD KISc_CENP_E 69 388 - -
Ssu7g2723 994 ProSitePatterns Kinesin motor domain signature. 288 299 IPR019821 GO:0003777|GO:0005524|GO:0007018
Ssu7g2723 994 PANTHER KINESIN-LIKE PROTEIN KIN-7K, CHLOROPLASTIC ISOFORM X1 57 993 - -
Ssu7g2723 994 Coils Coil 752 779 - -
Ssu7g2723 994 SMART kinesin_4 67 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g2723 994 ProSiteProfiles Kinesin motor domain profile. 69 388 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g2723 994 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Ssu7g2723 994 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 423 IPR027417 -
Ssu7g2723 994 Coils Coil 862 896 - -
Ssu7g2723 994 MobiDBLite consensus disorder prediction 897 927 - -
Ssu7g2723 994 Pfam Kinesin motor domain 75 388 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g2723 994 PANTHER CENTROMERE PROTEIN E 57 993 - -
Ssu7g2723 994 MobiDBLite consensus disorder prediction 15 62 - -
Ssu7g2723 994 Coils Coil 677 704 - -
Ssu7g2723 994 Coils Coil 953 973 - -
Ssu7g2723 994 Coils Coil 390 424 - -
Ssu7g2723 994 Gene3D Kinesin motor domain 61 419 IPR036961 -
Ssu7g2723 994 PRINTS Kinesin heavy chain signature 140 161 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g2723 994 PRINTS Kinesin heavy chain signature 254 271 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g2723 994 PRINTS Kinesin heavy chain signature 338 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g2723 994 PRINTS Kinesin heavy chain signature 289 307 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu7g2723 994 Coils Coil 820 854 - -
Ssu7g2723 994 Coils Coil 442 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2723 Ssu-Chr7 55195179 55239548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2723 1 720 Miscellaneous Gene Families AT5G06670 69.103 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2723 K11498 - gmx:100809643 1707.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2723 7 55195179 55239548 Ssu7g2723 7 55195179 55239548 ECH
Ssu4g1385 4 23035171 23054110 Ssu7g2723 7 55195179 55239548 PCT