Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2692 ATGTCTCAGTTTCCGTTAAAGTCCGTAACGGCATTCACCGCAAAGCCGAATCCGTTGGCCACGTTCGTCGCGATTCTCGTCCTCGGCGTCGTGGGATTTTATTCCCTGCATTTCCCTCTCCGTAAGTCCGCTCCCCTCGACGCCTCGCGCGTCCGCCACGTGTTCATTTCGTCGTCCTCGAACTCCACCATTTCGAACTACCTCCGCGCCCTCACCGCGCACCCTCACCTCGCGGGAACAAAACCCGCATCGCTCGCCGCGCGATACGTGCTCAGCCACTTCGCGGGTCTCGGACTCCAAACCAAGACCGTTAAACACCCCGCGCTGCTGTCCTACCCGGTGCGCTCCTCGCTCGCGGCGCATTTTAGCGACGGCGCGAGCGAGGAGTTTCGGTTGTCCGAACCGGACCGGTCCGGTTCGGAGGCCGTGGTGGCGCCGTACCACGCGTACTCGCCGTCGGGGTCGGTTTTCGCGCGGGCGGTGTTCGTCAACTACGGGCGGGAGGAGGACTTCCGGGCTCTGGCGGCGGCGGGGGTGGCCGTGGAGGGGTGCGTGGCGGTGGCGAGGGGCGGCGGGGGGGTGGGGCGGGGGGCGGTGGTGGAGGCGGCGGAGAGAGCGGGGGCGGCGGCGGCGGTGGTGTTCGGGGAGGGTGGGGACACGTGGCGGGAGGGGTTTGAGAGGGGGCACGTGATGAGGGGGGGGATAGGGGACCCGCTGAGTCCCGGGTGGGGTGGGGTGGAAGGAGGGGAGAGTTTGGGTTTGGAGGATAGTGAGGTTTTGAAAAGGTTTCCCAAAATTCCGTCCATGCCCTTGTCTGCTGAGGCCGCCGAGAGGATCTTGGCCTCCCTTGGTGGTGCTCCTCTGCCCTCGGATTGGAGGGCTACCCTAAAGTCATCCAAGGTTAGGAACATTGGTCCGGGACCCACACGCCTCAACTTCACTTATCAGGGTGAACTGAAGGTGGCTACCATTGAAAACGTTTTTGCCATTATCAAGGGACATGAAGAACCTGATCGCTATGTTCTGCTTGGGAACCATAGAGATGCATGGACATATGGTGCTGTTGACCCCAACAGTGGGACAGCAGCCCTACTTGACATTGCTCGTAGATATTCTATTCTATTGCGTTTGGGGTGGACTCCACGGAGGACCATCATTCTATGCAGTTGGGATGCAGAGGAATTTGGAATGATAGGATCCACTGAGTGGGTTGAACAAAACCTTGTTAATCTTCGTTCCAATGCTGTAGCGTACCTTAATGTAGACTGTGCTGTTCAAGGGCCAGGTTTCTTTGCTGGCTCAACTCCCCAGCTAGACAATCTCCTTCTCGAGGTCataaaaaagGTCAAGGATCCTGACTCTGAGGGTAAAATGATATATGAGAATTGGGCAGCTGCTGGTGGAAACTCTAATATTCAAAGGCTCAGTAGAGTTGATTCTGATTTTGCTCCATTTGTGCAACATGCAGGGGTTCCATCTATTGATGTATATTATGGAAAAGATTATCCTGTCTATCACACTGCTTTCGACTCCTATAACTGGATGACAGAGTCTGGAGATCCATTCTTTCAGCGCCATGTAGCTGTTACTGGCATTTGGGGGCTTCTAGCCCTTCGCCTAGCTGATGATTCCATTATACCTTTCAATTATCTTTCTTATGCGGATCAGTTACAGGAGTACAGTAACATATTGAGCAACCTGTTAGACAAGCGGATTTCTCTACATCCACTAACTGCGTCGACTCAAGAATTTGCTTCTGCTGCCAAAGAAGCTAATGATGAATCAAAGAAACTGGCATTGCAAGAAACTTCAGATCGTTTTGTAGATATGAAAATACGAGCATTGAATGATAAACTAATGCTTACGGAAAAAGGCTTCTTGGATGTGGACGGGCTTAAAGGAAGGGAATGGTTCAAGCATCTTGTTTTTGGGCCTCCTAGCGACCATGAAAGCAAGTTGGATTTCTTCCCTGGAATCGCTGACTCTATGTCTGGGATGGTtaaaatgagtgaaaaagaaAGGCTGGCTGCAATTCAGCATGAAATCTGGAGGGTTGCCAGGGCCATTCAAAGAGCTGCTTCAGCACTAAGAGGGGATTTGGCCTAA 2106 0.5323 MSQFPLKSVTAFTAKPNPLATFVAILVLGVVGFYSLHFPLRKSAPLDASRVRHVFISSSSNSTISNYLRALTAHPHLAGTKPASLAARYVLSHFAGLGLQTKTVKHPALLSYPVRSSLAAHFSDGASEEFRLSEPDRSGSEAVVAPYHAYSPSGSVFARAVFVNYGREEDFRALAAAGVAVEGCVAVARGGGGVGRGAVVEAAERAGAAAAVVFGEGGDTWREGFERGHVMRGGIGDPLSPGWGGVEGGESLGLEDSEVLKRFPKIPSMPLSAEAAERILASLGGAPLPSDWRATLKSSKVRNIGPGPTRLNFTYQGELKVATIENVFAIIKGHEEPDRYVLLGNHRDAWTYGAVDPNSGTAALLDIARRYSILLRLGWTPRRTIILCSWDAEEFGMIGSTEWVEQNLVNLRSNAVAYLNVDCAVQGPGFFAGSTPQLDNLLLEVIKKVKDPDSEGKMIYENWAAAGGNSNIQRLSRVDSDFAPFVQHAGVPSIDVYYGKDYPVYHTAFDSYNWMTESGDPFFQRHVAVTGIWGLLALRLADDSIIPFNYLSYADQLQEYSNILSNLLDKRISLHPLTASTQEFASAAKEANDESKKLALQETSDRFVDMKIRALNDKLMLTEKGFLDVDGLKGREWFKHLVFGPPSDHESKLDFFPGIADSMSGMVKMSEKERLAAIQHEIWRVARAIQRAASALRGDLA 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2692 701 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 19 698 IPR039373 -
Ssu7g2692 701 CDD M28_PSMA_like 322 548 - -
Ssu7g2692 701 Gene3D - 116 317 - -
Ssu7g2692 701 Gene3D Zn peptidases 62 547 - -
Ssu7g2692 701 Gene3D - 550 701 IPR036757 -
Ssu7g2692 701 SUPERFAMILY Zn-dependent exopeptidases 60 544 - -
Ssu7g2692 701 Pfam Transferrin receptor-like dimerisation domain 572 696 IPR007365 -
Ssu7g2692 701 SUPERFAMILY PA domain 109 328 IPR046450 -
Ssu7g2692 701 SUPERFAMILY Transferrin receptor-like dimerisation domain 547 698 IPR036757 -
Ssu7g2692 701 Pfam Peptidase family M28 326 513 IPR007484 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2692 Ssu-Chr7 54209403 54217701 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2692 K01301 - gmx:100817485 1110.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2692 7 54209403 54217701 Ssu7g2692 7 54209403 54217701 ECH
Ssu4g0744 4 11492424 11497690 Ssu7g2692 7 54209403 54217701 PCT