Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2676 ATGGAATCTGAAAATGGAGTTGCTGTGGAGGATGAGAAACATGTTATTGGGGAAACAACTGAGGAGAACATAAACAAAGAAGCTGAAAACGGTTGTAATGCTGAAATTCAGACCACGAATGAAGTATCTGAAGCAATTGAAAAAGTTGAAGGGCCCAAATCTGCAGCAAGTAAAAACTCAAAACCTGCCAAGGAACCTGGTGGCAAAGGTGGTGTTGCTTCAAAGAACAACAAATCTGCGACCAAAGACAAACCCAATTTGAAGTCCACAACCTCATCACCTCAAACACACAGGACAAACCTTTCCAAGAGCCTTTCTTTCCCAGCCAAATCAGCAGGTGGAGATGGCATGAAGAAAAGCCTTAATGGCACTCTTGTGAAGACAGAAACTAAGCATGCTAATGGGGCTAGAGTTGAGGCTTCCATTCGTCTTTCAAGCAGGCTGACAAACTCTAAAGTTAACTTAAAGGAGGCAAAAACAAACACTGGAAATTCCAACCAAAGGACCTCTTTGACATCCATGACTAGCCTTAAAAGCTCTAAGTCTGGAATGTCTACTGATACTCCTGCAAATGCGGTTGCCAAGAGCATTACATCTGAGGCATCCTTACCTGTTGATCAGATATCAAGCCCAGCAAAAACCGAAAAACCAAATAAAGAGGATGATGATGCTCATTCTACAACTTCAAGTCATTCTCCTCGTAGGAGGAGCAGTGGTTCTGGATTTTCCTTCAGATTGGAAGAAAGGGCAGAAAAGAGGAAGGAGTTCTTCTCAAAGTTAGAAGAGAAAATTCAGGAAAAGGAAGCAGAGAAAACTAACCAGCAAGAGAAATCAAAGGAAAACCAGGAGGCAGAGATCAAGCAATTGAGGAAGACGATGACATTCAAAGCCACTCCAATGCCAAGTTTCTATAAGGAACCTCCTCCAAAAGTTGAATTGAAGAAGATACCGACAACGCGCCCAAAATCTCCAAAGCTTGGAAGGCACAAAGGATCTGCTGTGAACAACTCAGACGATAAATCTTGTTCTAGTCCACACGGAAAGCAACAACGGAATGAATCAACCAAGGCAAAGGTAAAGGGTAATAAAGAAGTGATTTCAAAGAAACCAATAAGAAAAACTCAAGCCAAGCTGCAGTCACAGGAAACCGAAATCAGAAAAACTGAAAAGGATTGTGTGAGGTCTACTAAAATCAACCAAGATGCAAAAACTGGTACAGGAAACAATGAAGAATGCCATGATCCACCAGTTAACAATTCTGAATACCAAAATGACATGGAACTAGAATCCAAAAATGAGCTTGCTCAGAATGTTGCACTGGTCTTAAATTCATCCACACCCGATATTGTATATGAGGTTACTGTTGGAGTGTAG 1374 0.4141 MESENGVAVEDEKHVIGETTEENINKEAENGCNAEIQTTNEVSEAIEKVEGPKSAASKNSKPAKEPGGKGGVASKNNKSATKDKPNLKSTTSSPQTHRTNLSKSLSFPAKSAGGDGMKKSLNGTLVKTETKHANGARVEASIRLSSRLTNSKVNLKEAKTNTGNSNQRTSLTSMTSLKSSKSGMSTDTPANAVAKSITSEASLPVDQISSPAKTEKPNKEDDDAHSTTSSHSPRRRSSGSGFSFRLEERAEKRKEFFSKLEEKIQEKEAEKTNQQEKSKENQEAEIKQLRKTMTFKATPMPSFYKEPPPKVELKKIPTTRPKSPKLGRHKGSAVNNSDDKSCSSPHGKQQRNESTKAKVKGNKEVISKKPIRKTQAKLQSQETEIRKTEKDCVRSTKINQDAKTGTGNNEECHDPPVNNSEYQNDMELESKNELAQNVALVLNSSTPDIVYEVTVGV 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2676 457 MobiDBLite consensus disorder prediction 398 424 - -
Ssu7g2676 457 MobiDBLite consensus disorder prediction 265 424 - -
Ssu7g2676 457 MobiDBLite consensus disorder prediction 1 25 - -
Ssu7g2676 457 Coils Coil 371 391 - -
Ssu7g2676 457 MobiDBLite consensus disorder prediction 26 44 - -
Ssu7g2676 457 MobiDBLite consensus disorder prediction 265 290 - -
Ssu7g2676 457 MobiDBLite consensus disorder prediction 1 247 - -
Ssu7g2676 457 Coils Coil 250 292 - -
Ssu7g2676 457 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 1 457 - -
Ssu7g2676 457 MobiDBLite consensus disorder prediction 379 397 - -
Ssu7g2676 457 MobiDBLite consensus disorder prediction 336 350 - -
Ssu7g2676 457 MobiDBLite consensus disorder prediction 74 107 - -
Ssu7g2676 457 PANTHER PROTEIN WVD2-LIKE 4 1 457 IPR044833 GO:0008017
Ssu7g2676 457 MobiDBLite consensus disorder prediction 213 230 - -
Ssu7g2676 457 MobiDBLite consensus disorder prediction 351 371 - -
Ssu7g2676 457 Pfam Targeting protein for Xklp2 (TPX2) domain 242 311 IPR027329 -
Ssu7g2676 457 MobiDBLite consensus disorder prediction 143 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2676 Ssu-Chr7 53750860 53753144 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2676 - - gmx:100798810 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0764 4 11795743 11798308 Ssu7g2676 7 53750860 53753144 PCT