Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0764 ATGAAGAACACAATGGAATCTGAAAACGGAGTTGCTGTGGAGGAAGAGAAACGTGTTATTGGGGTAACAATCAAGGAAGAGAATATGAAGAAAGAAGTTGAAAAGGACTGTAATGGTGCAGAAATTCAGATCCAGAATGAAGTATCTAAACCCACAGTTGAGGCTGAAGGCCCCATTTCTGCAGTTGAAGCCTCTAAAACTACTTCTGCAAGTAAAAATTCAAAAGGTGCTAAGGAAACCCGTGGTAGAGCAAGTGTTGCTTCCAAGAACATCAAACCCGCCAAAGATAAATCCATTTTGAAGGGTCTAAGATCAATACCTCAAAAACAAAGGCCAACCCTTACCCAAAGCCTTTCTTTCCCAGCCAAATCAACTGGTGAAGATGCTATGCAGAAAAGCATTGATGGGTATCTTGGGAGGACAAAAGTTAAACACGTTCAAGGTAATGGGATTAGAGGTGAGGCCCCCATTCGTCATTCAAACAAGTCCACAAGCTCTGAAGTGAACTCACGGGCAAAAACCAACGCTGGCATACCTGGTTTGAAACGCTCTGCGTTTGGAAGGTCTACTCCAGTTACAGCAGTCACCAAGAACCATACTTCTGCAGCATCGTTACCCGTTGATCAAGTTTCAAACATAGTAAAAACTGCAAAAGCAAATAAAGAGGATGATGATTCTCATTCCACAACTTCAAGTGCTACTCCTCGTCAGGGAAGCAGTGGAAGTGGATTTTCCTTTAGATTGGAAGAAAGAGCTGAAAAGCGGAAAGAGTTTTTCTCAAAGTTGGAGGAAAAAATTCTGGCCAAGGAAGCAGAGAAAACTAACCAACAAGCAAAATCAAAGGAAAACCAAGAGGCAGAGATCAAGCTATTGAGGAAGAGCATGACATTCAAAGCGACTCCAATGCCAAGTTTCTATAAGGAACCACCTCCAAAAGTTGAGCTGAAGAAGATACCAACAACACGCGCAAGATCCCCCAGGCTTGGAAGGCACAAAGAATCTGCTATGAACAACAATTCAGGAGAAGATAAGTCTTGCCCCAGTCCACGTGGGAAACAACAGCAGAATGATTCAAACAAGGTGAAGGGTCATAAAGATGTGATTTCAAAGAAACCAATCCGGAAAACCCAAGCCAAGCTGAAGTCTCAGGAAAGTGTAACCACAGCAAGCAAAGAAGAAAGCCAAGATCCACATGATGTTAACAATTCTGAATGCAAAAATGACATTTAG 1230 0.4236 MKNTMESENGVAVEEEKRVIGVTIKEENMKKEVEKDCNGAEIQIQNEVSKPTVEAEGPISAVEASKTTSASKNSKGAKETRGRASVASKNIKPAKDKSILKGLRSIPQKQRPTLTQSLSFPAKSTGEDAMQKSIDGYLGRTKVKHVQGNGIRGEAPIRHSNKSTSSEVNSRAKTNAGIPGLKRSAFGRSTPVTAVTKNHTSAASLPVDQVSNIVKTAKANKEDDDSHSTTSSATPRQGSSGSGFSFRLEERAEKRKEFFSKLEEKILAKEAEKTNQQAKSKENQEAEIKLLRKSMTFKATPMPSFYKEPPPKVELKKIPTTRARSPRLGRHKESAMNNNSGEDKSCPSPRGKQQQNDSNKVKGHKDVISKKPIRKTQAKLKSQESVTTASKEESQDPHDVNNSECKNDI 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0764 409 MobiDBLite consensus disorder prediction 357 373 - -
Ssu4g0764 409 MobiDBLite consensus disorder prediction 146 247 - -
Ssu4g0764 409 Pfam Targeting protein for Xklp2 (TPX2) domain 244 313 IPR027329 -
Ssu4g0764 409 MobiDBLite consensus disorder prediction 230 244 - -
Ssu4g0764 409 MobiDBLite consensus disorder prediction 158 173 - -
Ssu4g0764 409 Coils Coil 259 284 - -
Ssu4g0764 409 MobiDBLite consensus disorder prediction 310 331 - -
Ssu4g0764 409 MobiDBLite consensus disorder prediction 391 409 - -
Ssu4g0764 409 MobiDBLite consensus disorder prediction 301 409 - -
Ssu4g0764 409 MobiDBLite consensus disorder prediction 48 127 - -
Ssu4g0764 409 MobiDBLite consensus disorder prediction 189 216 - -
Ssu4g0764 409 MobiDBLite consensus disorder prediction 332 356 - -
Ssu4g0764 409 PANTHER PROTEIN WVD2-LIKE 4 5 403 IPR044833 GO:0008017
Ssu4g0764 409 Coils Coil 30 50 - -
Ssu4g0764 409 MobiDBLite consensus disorder prediction 108 126 - -
Ssu4g0764 409 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 5 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0764 Ssu-Chr4 11795743 11798308 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0764 - - gmx:100794426 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0764 4 11795743 11798308 Ssu7g2676 7 53750860 53753144 PCT