Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2637 ATGTCGGTGAAGGAGTGCAAGCACCACCACGGGGGACATAAGAGGAGGATCTTCCTGCGAATATTCTGGGGCATCGTTGTGTTCCTCTTTATCGTTCTCGTCACAATCCTCATCGTATGGGCAATCCTTAGACCCACCAAACCCACCTTCATCCTCCAAGACGTCACCGTTTACGCCTTCAACGCCACGGTGCCGAACTTCTTGACGTCCAATTTCCAAGTCACGTTTTCCTCGCGCAACCCGAACGACCACATCGGAGTCTACTACGACCGCCTCGACACCTACGCCACTTACCGGAGCCAGCAGATCACCTACCGCACCGCCATCCCTCCATCCTACCAGGGCCACAAAGAGGTCGACGTTTGGTCGCCGTTTGTTTACGGCACCAACGTCCCCGTCGCGCCCTACAACTTCGTGGGCCTCAGCCAGGACCAGGCTAACGGTAACGTCCTCGTCACCATCAAAATTGACGGCAGGGTCCGTTGGAAAGTCGGCACCTTCATCTCCGGCCGCTACCACCTCTACGTCCGCTGCCCCGCGTACATCTCCTTCGGCCCCCGGAGCAACGGAATCGTCGTCGGCGAAAACGCCGTCAAGTATCAGTTAGTCCAACAGTGCTCGAGATTGAATATTCACTCGGCTGGAGATAAAGCTGCACCGAGTTTCAGGTTCCACttggtgtatatatatgttatttag 699 0.5451 MSVKECKHHHGGHKRRIFLRIFWGIVVFLFIVLVTILIVWAILRPTKPTFILQDVTVYAFNATVPNFLTSNFQVTFSSRNPNDHIGVYYDRLDTYATYRSQQITYRTAIPPSYQGHKEVDVWSPFVYGTNVPVAPYNFVGLSQDQANGNVLVTIKIDGRVRWKVGTFISGRYHLYVRCPAYISFGPRSNGIVVGENAVKYQLVQQCSRLNIHSAGDKAAPSFRFHLVYIYVI 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2637 232 Pfam Late embryogenesis abundant protein 75 178 IPR004864 -
Ssu7g2637 232 PANTHER OS05G0367900 PROTEIN 9 207 IPR044839 GO:0098542
Ssu7g2637 232 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 9 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2637 Ssu-Chr7 52443432 52445766 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2637 - - gmx:100788592 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2637 7 52443432 52445766 Ssu7g2637 7 52443432 52445766 ECH
Ssu4g0799 4 12433707 12434336 Ssu7g2637 7 52443432 52445766 PCT