Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2526 ATGGAATCGTTTCAAGGGGCCAGGGATGACATTTCCTTCCAAATGGGCCTGATTTGGAGCCAATTGAAAGAGCCGGTGATCGTGCCACTGCTGAGACTGGCAGTGTTTCTGTGCTTGGCCATGTCGTTGATGATGTTGGTCGAGAGGGTGTACATGGGCCTCGTCATTTGTTTGGTGAAGCTGTTCGGTCGAAAACCCGAGAAGCGTTACAAGTGGGAGCCTATGAAGGACGACGTTGAGTTGGGAAACTCCACTTACCCAATGGTCTTGGTCCAAGTGCCAATGTACAACGAAAGAGAgGTTTATCAACTATCAATTGGTGCCGCATGTGGCCTTTCTTGGCCTTCAGATAGGATCATCATACAAGTTCTTGATGATTCTACCGACCCAACAATCAAGGAGTTGGTGCAAATGGAATGTAGCAGATGGGCAAGCAAGGGGGTGAACATAAAGTACGAGGTAAGGGACAACCGAAATGGCTACAAAGCTGGAGCTCTAAAAGAAGGCATGAAACGCAGCTACGTGAAGCAATGTGATTATGTTGCCATCTTTGACGCGGATTTTCAACCAGAGCCTGATTTCCTCTGGCGCACTGTCCCATTCCTTGTCAACAACCCTGAACTTGGTCTCGTTCAGGCACGCTGGAAGTTTGtgaaTGCCAATGAATGTTTGATGACCCGGATGCAAGAGATGTCCCTAGATTACCATTTTACTGTGGAACAAGAAGTGGGGTCTTCCACTTACGCCTTCTTTGGCTTCAACGGGACTGCGGGTGTATGGAGAATTTCGGCGCTGAATGAAGCTGGGGGGTGGAAGGATAGGACCACAGTGGAAGATATGGACCTGGCTGTCCGAGCCAGTCTCAAAGGATGGAAATTCTTATACCTGGCCAATTTGAAGgttaaaaatgaattaccaaGTACTTTGAAGGCCTACCGGTACCAACAGCACCGGTGGTCTTGTGGGCCAGCCAATCTTTTCAAGAAAATGTTCTCGGAGATTATTCGAAACAAGAAAGTGTCCTTGACGAAGAAGATATATGTGATTTACAGCTTCTTCTTTGTCCGGAAGGTCGTGGCCCACATCAACACTTTTGTGTTCTATTGCATTGTGTTACCTGCAACAGTTGTGGTGCCTGAGGTTGCGGTCCCCAAGTGGGGTGCTGTGTATATCCCTTCCATCATCACACTCCTAAATGCTGTTGGAACACCAAGgTCACTCCACTTACTGGTCTTCTGGATTCTTTTTGAGAATACCATGTCTCTTCATCGAACAAAGGCAACAATTATTGGTCTACTAGAGGCTAGTCGAGTGAATGAATGGATTGTCACTGAAAAACTTGGAGATGCTCTCAAGGGTAAAGGTGGGGGTAAAGCACCCAAGAAGATTCGGTTCAGGATTGGAGAAAGGATTCACATGTTGGAACTTCTTGTTGGATGCTACCTCTTGCTCTGTGGCTGCTATGATTTTATGCTTGGGAAAAACCGCTTCTACATATTCCTATATCCAATCAATTGCTTTCTTCATCATGGCATTTGGATATGTTGGCACTTTCGTTCCCAACTCCTAGAAGGACTTGACAGCACTTCATTCAGATGTCTACATATTGTAATAGTGTTCACAGTATAA 1629 0.4561 MESFQGARDDISFQMGLIWSQLKEPVIVPLLRLAVFLCLAMSLMMLVERVYMGLVICLVKLFGRKPEKRYKWEPMKDDVELGNSTYPMVLVQVPMYNEREVYQLSIGAACGLSWPSDRIIIQVLDDSTDPTIKELVQMECSRWASKGVNIKYEVRDNRNGYKAGALKEGMKRSYVKQCDYVAIFDADFQPEPDFLWRTVPFLVNNPELGLVQARWKFVNANECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLANLKVKNELPSTLKAYRYQQHRWSCGPANLFKKMFSEIIRNKKVSLTKKIYVIYSFFFVRKVVAHINTFVFYCIVLPATVVVPEVAVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENTMSLHRTKATIIGLLEASRVNEWIVTEKLGDALKGKGGGKAPKKIRFRIGERIHMLELLVGCYLLLCGCYDFMLGKNRFYIFLYPINCFLHHGIWICWHFRSQLLEGLDSTSFRCLHIVIVFTV 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2526 542 SUPERFAMILY Nucleotide-diphospho-sugar transferases 84 363 IPR029044 -
Ssu7g2526 542 Pfam Glycosyltransferase like family 2 88 322 - -
Ssu7g2526 542 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 78 302 IPR029044 -
Ssu7g2526 542 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN A1 1 502 - -
Ssu7g2526 542 PANTHER - 1 502 - -
Ssu7g2526 542 CDD CESA_CaSu_A2 87 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2526 Ssu-Chr7 49567564 49573258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2526 2 502 Miscellaneous Gene Families AT5G03760 80.279 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2526 K13680 - gmx:100782772 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2526 7 49567564 49573258 Ssu7g2526 7 49567564 49573258 ECH
Ssu4g0915 4 14565789 14570161 Ssu7g2526 7 49567564 49573258 PCT