Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2511 ATGGGTAGTAGAAGATGGAATTGCTGTGCATGGTGGGGTTCAGAAGCATGTTCAACAATGAAGCTCTTCTTGTTCATGGTGCCTCTCTTAGTGGTTGCGGGGCTTGCTTCTATAAAGGGTCCAAGTGTTTGCAGATGGGATTTTATTGCAAAATGTTCTGCCTCATGGAGCCCTTTTAGTCCTCTTCCTTCTTCAAATTCCTCTCTACAAACACTTCATCAATCTAACCAAACTGAAGTTCTCAATGTCTCCAAACCCTGGTTCAATTCAACTCCTTTGAATGAATCTTATGAACCTCACCCAAGACAAAAGCAGAAAATAAAGTTCAGCATCTTAGGTAGAATCGAAGCTGTTCTAGCACAAGCTCGAGCTGCAATCAGAGAAGCCAGAAATGGGAATCAAACACAAGATCCAGACTATGTTCCAGTAGGTCCAATGTATTGGAATGCTAAGGCATTTCACAGGGGAGCCTCCAATTTTCATAATGGACCATGCAAAAGCATATACTCCATGGAGGGGAACTTCATCCATGCTATTGAAATGAATGATCGTTTTCGAACAAGAGATCCCAAGAAAGCACATGtgtttttccttccttttagtGTAGTAATGATGGTCCGATTTGTGTACGTAAGAGACTCTCACGACTTTGGCCCCATAAAAAAAACTGTCACGGACTATGTCAATGTCATTGCTGCAAGATACCCTTATTGGAACCGAAGCCTTGGAGCTGATCATTTCATGCTCGCTTGCCATGACTGGGTGAGCACCTCACTACgggCCAGAGGCTTCATTCTCCTTACCTTACCTGCGCAAGAACTCTATCGTGTACTTTGCAATGCCAACACCTCTGAAGGATTCGAGCCTGCAAAGGATGTTTCATTTCCTGAGATTAATCTCCAAACTGGCTCGATAAACGGTTTCGTTGGGGGGCCATCTGCATCTAAACGTTCAATTTTGGCTTTCTTTGCTGGGGGAGTTCATGGCCCCATTAGGCCGGTTCTTCTTGAGCATTGGGAAAACAAAGACGAAGATATTCAGGTTCACAAGTACCTCCCAAAGGGTGTTTCTTACTACGGCATGCTGAGGAAGAGCAAGTTCTGCCTCTGTCCCAGTGGGTATGAGGTGGCTAGTCCGAGAGTGGTGGAGGCAATCTACACAGGGTGTGTTCCTGTGCTCATTTCGGAGCACTATGTCCCTCCTTTTAGTGACATCTTGAATTGGAAGTCTTTCTCGGTTGAGCTTTCGGTGAAGGACATTCCTAACTTGAAGGACATTTTGATGAGTGTTTCTCCGAGACAATATATAAGAATGCAAAAAAGAGTAGGACAAATTCGGAGACACTTTGAGGTGCATTCTCCGCCCAAGCGATTTGATGTGTTTCACATGATACTTCATTCTGTGTGGCTTAGGAGACTCAACTTCAGAGTCCATGACGATCAATGA 1446 0.4378 MGSRRWNCCAWWGSEACSTMKLFLFMVPLLVVAGLASIKGPSVCRWDFIAKCSASWSPFSPLPSSNSSLQTLHQSNQTEVLNVSKPWFNSTPLNESYEPHPRQKQKIKFSILGRIEAVLAQARAAIREARNGNQTQDPDYVPVGPMYWNAKAFHRGASNFHNGPCKSIYSMEGNFIHAIEMNDRFRTRDPKKAHVFFLPFSVVMMVRFVYVRDSHDFGPIKKTVTDYVNVIAARYPYWNRSLGADHFMLACHDWVSTSLRARGFILLTLPAQELYRVLCNANTSEGFEPAKDVSFPEINLQTGSINGFVGGPSASKRSILAFFAGGVHGPIRPVLLEHWENKDEDIQVHKYLPKGVSYYGMLRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLISEHYVPPFSDILNWKSFSVELSVKDIPNLKDILMSVSPRQYIRMQKRVGQIRRHFEVHSPPKRFDVFHMILHSVWLRRLNFRVHDDQ 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2511 481 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 60 478 IPR004263 GO:0006486|GO:0016757
Ssu7g2511 481 Pfam Exostosin family 157 429 IPR040911 -
Ssu7g2511 481 PANTHER EXOSTOSIN FAMILY PROTEIN 60 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2511 Ssu-Chr7 49168767 49174501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2511 - - gmx:100777099 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2511 7 49168767 49174501 Ssu7g2511 7 49168767 49174501 ECH
Ssu4g0929 4 14791192 14794863 Ssu7g2511 7 49168767 49174501 PCT