Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0929 ATGAAGGACCAAAACGACACGTGTGGTCCAAAACACGTCGCATGGGAGAAAGCCAGGAATCAGAGTCAAAACCACAGAGGGCTTATTTCTGTATTGGGTCCTAACCCTTCTAGTTGGCTTTTTATTGCGAAGCCACCTCTGTTATTGAGCTCTGTTACTTCCTCTTCCTCAACTAGTAGTGGTGCTGTGACCACCCCATCTGAGGTGAAGCAGAAAAAAGGGTTAGTGGTGGTGGCCGTTGATACTCATGGTGGAGAAAGAGTTATCTCTGATGACACTGACTTCAATCACTCCTCTACTCCCCCATTTTCCGCTCAGGCCATTCAAACACCTCAACAACCTAACAAGGATGAACAAAATGTTTCCCAACTTTCGCCCAACGTGACTCCGAATGAGTCTTATGTTCCACCAGAGAGGCCAAAGCTGCAGAGAAAATTCAGCATCTTAGATAGAACCGAAGCTGGTCTATTACAAGCTCGAGCTGCAATTAGAGAAGCAAGAAACGGGAATCAAACACAAGATAGAGACTATGTTCCAGTTGGTCCAATGTATAACAATGCTAATGCATTTCACAGGAGTTACTTAGAAATGGAGAAACAGTTCAAAGTATTCGTCTACGAAGAAGGGGAACCTCCAGTTTTCCACAATGGACCTTGCAAAAGCATATACTCCATGGAGGGAAATTTCATCCATGCTATTGAGATGAATGACCAATTCCGAACAAGAGATCCTGAGAAAGCACATGTGTATTTCTTACCTTTTAGTGTAGCAATGCTGGTACAATTTGTCTATGTACGCGACTCTCATGACTTTGGCCCCATAAAAAAAACTGTCACGGACTATGTCAATGTCATTGCCGCAAGATATCCCTATTGGAACCGAAGCCTTGGAGCTGATCATTTCTATCTTGCTTGCCATGATTGGGGGCCAGAGACTTCACATTCCGTTCCTAAGTTGCACAAGAATTCGATCCGTGTGCTGTGCAATGCTAACACCTCTGAGGGATTCAAGCCTTCAAAGGATGTCTCTTTGCCAGAAATTAATCTCCAAACCGGTTCAATAAATGGTTTGGTTGGTGGGCCATCTCCATCTAGACGTTCACTCTTGGCCTTCTTTGCTGGTGGGCTTCACGGCCCAATTAGGCCCGTTCTTCTTGAACACTGGGAAAACAAGGACGAAGACATCCAGGTTCACAAGTACCTTCCCAAGGGTGTGTCCTACTATgagatgctgaggaagagcaaGTTCTGCCTTTGTCCTAGTGGGTACGAGGTGGCAAGCCCCAGAGTAGTGGAGGCAATATACACAGGGTGTGTCCCGGTACTCATTTCAGATCATTATGTCCCTCCATTCAGTGATGTTTTGAATTGGAAGTCTTTTTCCGTTGAGGTTTCGGTGAAGGACATTCCCAAATTGAAGGAGATTCTGTCGAGTATTTCTCCAAGGCAGTATATAAGAATGCAGAGAAGAGTAGGACAGGTTAGGAGGCACTTCGAGGTACACTCTCCTCCCAAGAGGTTCGATGTGTTCCATATGATCCTTCATTCTGTATGGCTTAGAAGATTGAACTTTAGAGTCCACGATGATCAATAA 1593 0.4432 MKDQNDTCGPKHVAWEKARNQSQNHRGLISVLGPNPSSWLFIAKPPLLLSSVTSSSSTSSGAVTTPSEVKQKKGLVVVAVDTHGGERVISDDTDFNHSSTPPFSAQAIQTPQQPNKDEQNVSQLSPNVTPNESYVPPERPKLQRKFSILDRTEAGLLQARAAIREARNGNQTQDRDYVPVGPMYNNANAFHRSYLEMEKQFKVFVYEEGEPPVFHNGPCKSIYSMEGNFIHAIEMNDQFRTRDPEKAHVYFLPFSVAMLVQFVYVRDSHDFGPIKKTVTDYVNVIAARYPYWNRSLGADHFYLACHDWGPETSHSVPKLHKNSIRVLCNANTSEGFKPSKDVSLPEINLQTGSINGLVGGPSPSRRSLLAFFAGGLHGPIRPVLLEHWENKDEDIQVHKYLPKGVSYYEMLRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVPPFSDVLNWKSFSVEVSVKDIPKLKEILSSISPRQYIRMQRRVGQVRRHFEVHSPPKRFDVFHMILHSVWLRRLNFRVHDDQ 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0929 530 MobiDBLite consensus disorder prediction 94 132 - -
Ssu4g0929 530 MobiDBLite consensus disorder prediction 1 22 - -
Ssu4g0929 530 Pfam Exostosin family 198 479 IPR040911 -
Ssu4g0929 530 PANTHER EXOSTOSIN FAMILY PROTEIN 98 527 - -
Ssu4g0929 530 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 98 527 IPR004263 GO:0006486|GO:0016757
Ssu4g0929 530 MobiDBLite consensus disorder prediction 87 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0929 Ssu-Chr4 14791192 14794863 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0929 - - gmx:100806278 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0929 4 14791192 14794863 Ssu4g0929 4 14791192 14794863 ECH
Ssu4g0929 4 14791192 14794863 Ssu7g2511 7 49168767 49174501 PCT