Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2509 ATGGGAATCATGGCACTGAAGGCAGAGAACTTGAAGCCAGTTATCCTCAAAGCTGGTGTTCCCTTGGCTGCATCTTTGGCAGGTTTGATCTATGCATGGATCATTGCAAAGAAAAACTTATCTGCCAAAGTTTCTTCTTTACCAGAAAATGAGTGTggttctccaaaagccaaacaTGAAGAAAGCTTTGACAACCTTTCTTATGTGGAAGTTGAAGAATCTTCTACTCCCATGAATAGCAGTGTTCTTTCTGGGAGCTTGGTGATCCATGATGACAACAACCCATGTTTGGAACAACAGATTACTAGTCTAAGAAGCCAAATTGAAGGTCTTCAAATGAGAGAACTGGCCTTGCGTATGCAGTTTGAGCTGTATTGTGAAATGAAGGAACAAGAATCTCTACTTGCGGGAGTCAAAAACATGTTATCCTTGGAGAATGATCATGTTGAGTTCTTGAATAAAGAAATTTCGTCCATAGAGACCGAGACTATGAGGTTGGAGAATTTTGTAGTCCAATACATGAGGGTTCTTGAACAGCTTGAGTATTGGAAGTCACGGAATAGGGTGCTCCAAAGGAGGGTTCAGAGGCTACTCAGGGACTCAAAGGCCAAATCCCGCTTGATAAAGGGTCAGGCTTTGAAGATCAAAGAGAAAGAAGCAGAAATATTGAGAAACCATGATGCCTTGCAAACAAGGGTCAGTGTCATTAACAAGTTAGAGGATGAAATCAGAGAGCTACAAAGGATTTTGGATCAACTGGAGGATGAGAAGAACGAGGTTGTGAAGAAGCTTGAAACAGCAGAAGCGTATGCGTCTAAGTTATACAAGGAAAAGATACATAGAAAACCATTGAAATATTACTTGGAGGCTGAATCAGGAGATGTGAGTAAGGAAGATTACAACAAGGTTCTCAATGAATTGGAGGAGGTCAAGAAGGAACGTGCAACTGAAGTTGAAGAGCTGTTTCATCTGAGGAGGATCAATGCCTGCTTAAGGCAAGAGTTGATGAGGCACTATGAACAACAACAGGAGCGGGATAGAGACCATGTAGAGGTGGAGTTTGAAGGAGGCTTAGGAGTTGTGCAGCATGACTCAGAGCATGAATTGCGTCATTCCCTTTTGGATCATCACAATGTGTCTGCTCATGGGGATCGTGCTTCTTCCAAAAGGAGAAAATTGCTTAAGAGGCTGAAGAGGTGGGTTGAAGGCAGTGAAAAGGTAAGAGTGAAGCCTGAAATTAAGGGCCTTGATAGGCATTCTGTTTCCTATGGATCAAAGAAACCTGAAGTTCCTCCAAGTGCAAGGTTCTGCTCTAGTGCTTGA 1323 0.4187 MGIMALKAENLKPVILKAGVPLAASLAGLIYAWIIAKKNLSAKVSSLPENECGSPKAKHEESFDNLSYVEVEESSTPMNSSVLSGSLVIHDDNNPCLEQQITSLRSQIEGLQMRELALRMQFELYCEMKEQESLLAGVKNMLSLENDHVEFLNKEISSIETETMRLENFVVQYMRVLEQLEYWKSRNRVLQRRVQRLLRDSKAKSRLIKGQALKIKEKEAEILRNHDALQTRVSVINKLEDEIRELQRILDQLEDEKNEVVKKLETAEAYASKLYKEKIHRKPLKYYLEAESGDVSKEDYNKVLNELEEVKKERATEVEELFHLRRINACLRQELMRHYEQQQERDRDHVEVEFEGGLGVVQHDSEHELRHSLLDHHNVSAHGDRASSKRRKLLKRLKRWVEGSEKVRVKPEIKGLDRHSVSYGSKKPEVPPSARFCSSA 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2509 440 MobiDBLite consensus disorder prediction 415 440 - -
Ssu7g2509 440 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 4 440 IPR040265 -
Ssu7g2509 440 PANTHER CHUP1-LIKE PROTEIN 4 440 - -
Ssu7g2509 440 Coils Coil 236 270 - -
Ssu7g2509 440 Coils Coil 297 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2509 Ssu-Chr7 49133034 49134356 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2509 - - gmx:100819954 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2509 7 49133034 49134356 Ssu7g2509 7 49133034 49134356 ECH
Ssu4g0932 4 14841108 14842858 Ssu7g2509 7 49133034 49134356 PCT