Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0932 ATGGAAAACACATCGTCAAAACCTGAGGTCATAAAGCCAATGATCCTCAAAGCTGGTGTTCCTTTGGCTGTGTCTTTTGTTGGTTTCATCTATGCTTGGTTCATGGCAAAGAAAAGCCTCTCTAAGACCTCTTCTTTATCACCAAATGAAGCAAGTTCCCATGAAACCAATTCCCACCATGAGCCTAAATATGAAGAAAGTTGTCATAGTCATAGCCTCTCTTGTATGGAAGATGAAGGACATAGTACAACAGTGGATGACAGTGTTGTTGCTGAAAGCTCGGTGATCCATGACCCCCCATGTTCAGAAGGAGAGATCAATGGCTTAAGAAGCAGGATTGAAGGTATGCAAATGAAAGAGCTGGCCTTACGTTTGCAGTTTGATCGTTATTGTGACTTGAAGGAGCAAGAAACTGTGGTTGGGGAGATCAAAAACATGTTGTCACTAGAGACCGCTCGTGTAGACTTCTTGGATAGGGAGATTTCATCGATGGAGATACAGAATAGGAGGTTGGAGAGTTTTGTTGAGCAATATCTCAGAGTTGTGGAACAGATTGAGCGTTGGAAATCTGAGAATAGAATGCTTAGGAGGAAGTTTCAGAAGCTAATGAAGAAATCAAAGGCACAAACCCGCCTGGCGAAGGAGCAGGCTGTGAAGATCAAACTGGAAGAAGCAGAAATCTTGAGAAGCCGTGATGCCttggaaacaaaaattgatGTCATAGGTAAACTAGAGGATAAACTGGAAGAGCTGCAAAGGGCTTTGGATCAATTGCAGGTTGAGAAGAATGAACTTTTGAAGAAGCTTGACACAGCAGAAAAATCCTATGCTTCTAAGATTGAAGCTGGAGATGTAAGTAGGGAAGAGTACAAACAGCTTCTGGATGAATTGGAGAAAGTCAAGAAGGAACGAGCAGATGAAGCTAAAGAACTCATTTACTTGCGGTGGACCAATGCTTGTCTAAGGCACGATCTAATGAGGCACCATGAACAACAACAGAATCAGGATAAAACCCACATAGAATTGGAATTTGGAAGAAGTGATGAAGTTATCCATTATGACTCAGAGCATGAATTACACAATTCCCTTTTGGAGCATCATAGTGATCCTTCCTTTGATGAGCATCCTAGTTCTCATGATCATAGTGACAGTGCTTGTTCAAAAAGGACAAAGTTGCTTGAAAGGCTAAAGAGATGGGTGGAAGGCAGTGAAAAGGCGAGAGTTGGGCATTCAGTTTCCAAAGGGGCAGAGGAACATCTTGTTCCTAGGAGGAGGTCATGCTCTAGTGCTTGA 1293 0.4215 MENTSSKPEVIKPMILKAGVPLAVSFVGFIYAWFMAKKSLSKTSSLSPNEASSHETNSHHEPKYEESCHSHSLSCMEDEGHSTTVDDSVVAESSVIHDPPCSEGEINGLRSRIEGMQMKELALRLQFDRYCDLKEQETVVGEIKNMLSLETARVDFLDREISSMEIQNRRLESFVEQYLRVVEQIERWKSENRMLRRKFQKLMKKSKAQTRLAKEQAVKIKLEEAEILRSRDALETKIDVIGKLEDKLEELQRALDQLQVEKNELLKKLDTAEKSYASKIEAGDVSREEYKQLLDELEKVKKERADEAKELIYLRWTNACLRHDLMRHHEQQQNQDKTHIELEFGRSDEVIHYDSEHELHNSLLEHHSDPSFDEHPSSHDHSDSACSKRTKLLERLKRWVEGSEKARVGHSVSKGAEEHLVPRRRSCSSA 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0932 430 Coils Coil 234 275 - -
Ssu4g0932 430 MobiDBLite consensus disorder prediction 54 70 - -
Ssu4g0932 430 MobiDBLite consensus disorder prediction 366 387 - -
Ssu4g0932 430 MobiDBLite consensus disorder prediction 44 70 - -
Ssu4g0932 430 PANTHER CHUP1-LIKE PROTEIN 1 430 - -
Ssu4g0932 430 Coils Coil 283 310 - -
Ssu4g0932 430 MobiDBLite consensus disorder prediction 403 424 - -
Ssu4g0932 430 Coils Coil 185 205 - -
Ssu4g0932 430 MobiDBLite consensus disorder prediction 403 430 - -
Ssu4g0932 430 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 430 IPR040265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0932 Ssu-Chr4 14841108 14842858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0932 - - gmx:100805210 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0932 4 14841108 14842858 Ssu4g0932 4 14841108 14842858 ECH
Ssu4g0932 4 14841108 14842858 Ssu7g2509 7 49133034 49134356 PCT