Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2495 ATGTCTCCTGCAATGGTAGGAAGTGATGAGAAGGGTGAGGATGGAAGTCAATATCAGAAAGGAGTGAAGCACCTCGTTGAGAATGGTCTTCAGAGGATACCTAAAAAGTACGTACTTCCTCCTTCTGACCGACCTGTTACAAATTCAGAAGAATCAAATGTTGCCAAGCAAAACCTTCAGCTACCCATCATTGATTTTTCTGAATTGATTGGTCCAAGAAGGCCCCAAGTCCTTCAATCCCTAGCCAATGCTTGTGAACAGTACGGATTTTTTCAGCTGGTAAACCACGGCATCTCAGATGATGTTATCGGCAACATGAGGGATGTGAGTGGCAGATTCTTCGATCTTCCTTTTGAGGAAAGAGCCAAGTACATAACAACTGATATGCGTGCATCGGTTCGATATGGAACTAGCTTCAGCCAAACCAAAGACTCCGTGTTCTGTTGGAGGGACTTCTTGAAACTCCTCTGCCATCCGTTGCCCGATTTCCTCCCCCACTGGCCTGCTTCCCCTTTAGACTTTAGGAAAGTGGCAGCCACCTACGCGGAAGAAAGCAATCAGTTGTTCCTGACCTTGATGGAAGCCATCCTTGAGAGTTTAGGAATCATAGAAGGCAACCAAGAAGAGGAGACAGAAGGAAAGGACAATATTCTGAAAGATTTGGAAGATGGGAGCCAGATGATGGTGGTCAACTTCTACCCAGCTTGCCCTGAACCAGACCTAACCTTGGGGATTCCCCCTCACTCTGACTATGGATTCCTCACACTCCTCCTCCAAGATCAGGTCGAGGGTTTGCAGATACAATTCCAAGGTCAATGGTTCACTGTTCAACCTATCAATAACGCCTTCGTTGTCAATGTTGGTGATCACTTAGAGATACATAGCAACGGGAAGTACAAGAGCGTGTTACATAGGGTGGTCGTGAATGCAGCGAAGAATAGGACGTCCGTGGCTTCGCTGCATAGCCTTCCTTTCAACTGCACCATAAGACCGTCACCCAAACTCGTTGACGAAGCGAATCCCAAACGCTACGCAGACACGAATTTTGATACTTTTCTTGCCTACGTTTCCACCAGAGAGCCCAAGAGAAAGGATTTCCTGGACTCTAGGAAATTGACGACTTCGTGA 1128 0.4681 MSPAMVGSDEKGEDGSQYQKGVKHLVENGLQRIPKKYVLPPSDRPVTNSEESNVAKQNLQLPIIDFSELIGPRRPQVLQSLANACEQYGFFQLVNHGISDDVIGNMRDVSGRFFDLPFEERAKYITTDMRASVRYGTSFSQTKDSVFCWRDFLKLLCHPLPDFLPHWPASPLDFRKVAATYAEESNQLFLTLMEAILESLGIIEGNQEEETEGKDNILKDLEDGSQMMVVNFYPACPEPDLTLGIPPHSDYGFLTLLLQDQVEGLQIQFQGQWFTVQPINNAFVVNVGDHLEIHSNGKYKSVLHRVVVNAAKNRTSVASLHSLPFNCTIRPSPKLVDEANPKRYADTNFDTFLAYVSTREPKRKDFLDSRKLTTS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2495 375 PRINTS Isopenicillin N synthase signature 81 98 - -
Ssu7g2495 375 PRINTS Isopenicillin N synthase signature 248 269 - -
Ssu7g2495 375 PRINTS Isopenicillin N synthase signature 283 309 - -
Ssu7g2495 375 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 12 372 - -
Ssu7g2495 375 MobiDBLite consensus disorder prediction 1 21 - -
Ssu7g2495 375 Pfam non-haem dioxygenase in morphine synthesis N-terminal 61 159 IPR026992 -
Ssu7g2495 375 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 223 323 IPR005123 -
Ssu7g2495 375 Gene3D - 14 355 IPR027443 -
Ssu7g2495 375 Pfam 2OG-Fe(II) oxygenase superfamily 226 321 IPR044861 -
Ssu7g2495 375 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 372 - -
Ssu7g2495 375 SUPERFAMILY Clavaminate synthase-like 20 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2495 Ssu-Chr7 48910193 48913186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2495 19 352 Glycosyltransferase AT5G59530 33.908 1.31e-51 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2495 - - gmx:100818253 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2495 7 48910193 48913186 Ssu7g2495 7 48910193 48913186 ECH
Ssu4g0943 4 15029690 15032812 Ssu7g2495 7 48910193 48913186 PCT