Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2488 ATGAGTTCCGAAGCACCCAAACTCAACTTTGTTCTGTTTCCTCTGATGTCCCAAGGCCACATGATCCCCATGATGGACATTGCAAAAATTCTGGCGCAGCAGGGTGTTTCTGTCACAGTGATCACCACACACCACAATGCATCACGCTTCACAGCAACTTTTGCTCGCTCCATCGATTCAGGGTCTCAAATCAAATTAGTTGAACTCCAATTCCCATATCAAGAAGCTGGATTGCCAGATGGGTGTGAGAATCTTGATATGTTACCTTCACTAGGCACTGGCTTGAGTCTCTTCAATGCAGCTAACAGTAACACCCTGAAGGAACAAGTGGAAAAACTCTTTGAAGAGTTAACGCCTCCACCAAGCTGCATAATTTCTGACATGTGTCTGCCATACACAGCCAACATCGCTGGCAAATTCAACATCCCTCGGATTTCTTTCGTAGGACAAAGTTGCTTCAGTCTCTTCTGTCTGTACAACCTGGGAATCCACAGAGTTCTGTCAGGCATAACCTCAGAAACTGAGTACTTTGTTTTGCCTGGCACAAGACCCTTTGACATTTTCCTTGTTTATTTTGGGACGGAGATACGCGCTGCACTTTCCATGCTAGAAGAGCTTCTTGAAAAGCTAAACCCCTTTCCATGCTGCATTATATCTGACAAGTACATGCCTTGTGTTGCCGATATCGCAATCAAGTTCAAGGTCCCGAGAATAGTATTTGATGGGACTAATTGTCTCAATCTCTTGTGCAATCACAACTTGCATGGTTATAAGGTCTATGAGACTGTCTCTGATTCAGATCATATTATTGTCCTCGGATTACCCCACAGAATTGAAATGAGGAAATCTCACTTGCCCTTAATATTCAGGGCCTAA 876 0.4395 MSSEAPKLNFVLFPLMSQGHMIPMMDIAKILAQQGVSVTVITTHHNASRFTATFARSIDSGSQIKLVELQFPYQEAGLPDGCENLDMLPSLGTGLSLFNAANSNTLKEQVEKLFEELTPPPSCIISDMCLPYTANIAGKFNIPRISFVGQSCFSLFCLYNLGIHRVLSGITSETEYFVLPGTRPFDIFLVYFGTEIRAALSMLEELLEKLNPFPCCIISDKYMPCVADIAIKFKVPRIVFDGTNCLNLLCNHNLHGYKVYETVSDSDHIIVLGLPHRIEMRKSHLPLIFRA 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2488 291 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 181 - -
Ssu7g2488 291 Gene3D Glycogen Phosphorylase B; 6 190 - -
Ssu7g2488 291 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 202 286 - -
Ssu7g2488 291 PANTHER GLYCOSYLTRANSFERASE 202 286 - -
Ssu7g2488 291 PANTHER GLYCOSYLTRANSFERASE 7 181 - -
Ssu7g2488 291 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 187 287 - -
Ssu7g2488 291 Gene3D Glycogen Phosphorylase B; 191 291 - -
Ssu7g2488 291 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2488 Ssu-Chr7 48771338 48775476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2488 199 287 Glycosyltransferase AT2G36790 34.737 7.24e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2488 K13496 K22771 gmx:100790358 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2488 7 48771338 48775476 Ssu7g2488 7 48771338 48775476 ECH
Ssu4g0960 4 15257219 15258733 Ssu7g2488 7 48771338 48775476 PCT