Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2476 ATGTCTGGCCCTGTGGCCACAGTTGATAATTTGGATGGAGCACTTTCTTGTGCAGAGAGAACAAAATCTCTTGATGCCATTTCTGAAATAGACCGTATATCTATATTGACAAACGGTGAAGCTGATCATTCCTCTGAAGTTGCTGGCTTTAGAATAGGGGAACTCTTACTTTCTAATGGAGAATCATATTCTGGGCCCCTTCTTGGTAACACTCCAGAGGGTCAGGGTAAGTATGTATGGTCAGATGCTTGTGTATATGAGGGTGAGTGGAGAAGGGGGATGAGAAATGGGATTGGGAAAATACGTTGGCCTTCTGGAATAGTGTATGAGGGTGAGTTCTCAGGTGGCTATATCCATGGTACAGGAACTTATATTGCCCCTGGTAATCTGACCTACAAAGGTCGGTGGCGATTGAATCTTAAACATGGGTTGGGTTATCAAGTTTATCCAAATGGAGATATCTTTGAAGGCTCTTGGATCCAAGGAACACCAGAAGGGCCAGGCAAGTATACCTGGGCaaatggaaatgtatatttGGGAAATATGAAAGGTGGGAGAATGTCAGGAAAAGGAACTCTCACCTGGGTTAATGGTGACTCATTTGAAGGAAGCTGGTTAAATGGTATGATGCATGGGCTTGGGGTATATACGTGGAGTGATGGAGGCTGCTATGTTGGGACTTGGACACGGGGTCTGAAAGATGGCAAAGGAACCTTCTATCCGAAAGGCAGCTGTCTTCCATCTGCGCAAGAAATATATCTCAATGCATTGAGAAAAAGAGGTCTGTTGCCAGATATGAGAAAACAGAACCGGGTACATATTCATCATGCTGCTTCAGTTGATATGGGAGATGTCAAGGTTGGTGAGAGTCAGAGATCAAGTCATGTTTCATCTGATAAGCTTGCCAAAGTGAACCTGTTAAATCTGGAACAATCTCGCAGCAAAAATATTTCTCTCGAAAGGCGCTGGAGTCTTGAGGTATCTATTGAGAAAGTGATTGGGCATGATTCAAAATTAGGTTCAACAGATTCTGTAGCAGAAAATGGAGATAAAGAGGCTGATGCAAAGGTCCCAATTTTGGAACGTGAGTATACACAAGGTGTATTAATAAGTGAGTTAGTTTTAAATGATAGTTTTTCATCAATGTCTAGAAGGGCAAAACAGCTTCAAAAAAAACTTGccaaagatattaaaaaacctGGTGAAGCAATCATTAAAGGTCATAGGAGCTATGATCTCATGCTTAGTTTGCAGCTTGGAATAAGGTATACTGTGGGAAAGATTACACCAATACAGAGGCGAGAAGTTCGAGCATCAGATTTCGGTCCTAGAGCAAGCTTTTGGATGAATTTTCCTAAAGAAGGTTCTCAATTGACGCCTCCTCATCAATCAGAGGATTTTAAATGGAAAGATTATTGCCCTATGGTGTTCAGAAATTTAAGAGAGTTGTTCAAGATTGATGCCGCTGACTATATGATGTCCATTTGTGGAAATGATGCACTGAGGGAACTTTCTTCTCCAGGGAAAAGTGGTAGTGTCTTTTTCCTGTCTCAGGATGATCGATTCATGATTAAGACACTGCGAAGATCTGAAGtaaagGTTCTTCTAAAAATGCTTCCAGACTATCATCATCATGTGAAGACATATGATAATACACTTATCACAAAATTTTTTGGTCTGCACAGGATTATACCTTCGAGTGGTCAAAAGTTTCGCTTTGTCGTAATGGGAAATATGTTTTGCACAGAATTAAGGATCCATAGGAGATTTGATTTGAAAGGTTCATCTCTTGGACGTTCTTCGGACAAGATAGAAATTGATGAGAACACCACTCTTAAAGATTTGGATCTGAACTACTGCTTTCACTTGGAACCATCTTGGCGGGAGTCTTTATTAAACCAGATTGAGATTGACAGCAAGTTCTTGGAATTACAACAGATAATGGATTACAGTCTCCTTCTGGGTGTTCACTATCGAGCTCCGCAGCAGCTGCGTCCTCTGCCATCATACAATCAAAGTGCAGATGGATTGGCAATTCTTGCAGAGGAAGACCCTCTAGAGGATGAAGTATCCAACTATCCACAAGGGCTTGTTCTGGTCCCTCGAGGTGCAGATGATAATAGTGTTGTTGTAGGGCCACACATTAGGGGTAGCAGATTGCGAGCTTCAGCTGCTGGTGACGAGGAGGTGGATCTACTTCTACCCGGTACAGCAAGGCTACAAATCCAGCTAGGTGTGAACATGCCTGCTAGGGCAGAGCAGATTCCAGGTAAAGAGGAAGTGCAAATGTTTCACGAGGCTTACGATGTTGTACTTTACCTGGGTATAATTGACATATTGCAAGAGTACAACATGACTAAGAAGATTGAACATGCATATAAATCTATTCAGTTTGATTCATTATCTATCTCGGCGGTGGACCCTACATTCTACTCACGTCGCTTCCTCGATTTTATTCAGAAAGTGTTCCCACCACATGAAATGGCAGGATAA 2493 0.4152 MSGPVATVDNLDGALSCAERTKSLDAISEIDRISILTNGEADHSSEVAGFRIGELLLSNGESYSGPLLGNTPEGQGKYVWSDACVYEGEWRRGMRNGIGKIRWPSGIVYEGEFSGGYIHGTGTYIAPGNLTYKGRWRLNLKHGLGYQVYPNGDIFEGSWIQGTPEGPGKYTWANGNVYLGNMKGGRMSGKGTLTWVNGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKGTFYPKGSCLPSAQEIYLNALRKRGLLPDMRKQNRVHIHHAASVDMGDVKVGESQRSSHVSSDKLAKVNLLNLEQSRSKNISLERRWSLEVSIEKVIGHDSKLGSTDSVAENGDKEADAKVPILEREYTQGVLISELVLNDSFSSMSRRAKQLQKKLAKDIKKPGEAIIKGHRSYDLMLSLQLGIRYTVGKITPIQRREVRASDFGPRASFWMNFPKEGSQLTPPHQSEDFKWKDYCPMVFRNLRELFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRRSEVKVLLKMLPDYHHHVKTYDNTLITKFFGLHRIIPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSSDKIEIDENTTLKDLDLNYCFHLEPSWRESLLNQIEIDSKFLELQQIMDYSLLLGVHYRAPQQLRPLPSYNQSADGLAILAEEDPLEDEVSNYPQGLVLVPRGADDNSVVVGPHIRGSRLRASAAGDEEVDLLLPGTARLQIQLGVNMPARAEQIPGKEEVQMFHEAYDVVLYLGIIDILQEYNMTKKIEHAYKSIQFDSLSISAVDPTFYSRRFLDFIQKVFPPHEMAG 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2476 830 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 496 821 IPR002498 GO:0016307|GO:0046488
Ssu7g2476 830 Gene3D - 579 823 - -
Ssu7g2476 830 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 58 185 - -
Ssu7g2476 830 SUPERFAMILY SAICAR synthase-like 406 823 - -
Ssu7g2476 830 PIRSF PIP5K_plant 6 827 IPR017163 GO:0005524|GO:0016308
Ssu7g2476 830 SMART PIPK_2 437 824 IPR002498 GO:0016307|GO:0046488
Ssu7g2476 830 Pfam MORN repeat 155 177 IPR003409 -
Ssu7g2476 830 Pfam MORN repeat 132 153 IPR003409 -
Ssu7g2476 830 Pfam MORN repeat 224 244 IPR003409 -
Ssu7g2476 830 Pfam MORN repeat 109 125 IPR003409 -
Ssu7g2476 830 Pfam MORN repeat 201 222 IPR003409 -
Ssu7g2476 830 Pfam MORN repeat 178 199 IPR003409 -
Ssu7g2476 830 Pfam MORN repeat 70 82 IPR003409 -
Ssu7g2476 830 Pfam MORN repeat 86 106 IPR003409 -
Ssu7g2476 830 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 407 823 IPR002498 GO:0016307|GO:0046488
Ssu7g2476 830 Gene3D - 65 114 - -
Ssu7g2476 830 Gene3D - 115 160 - -
Ssu7g2476 830 Gene3D - 161 207 - -
Ssu7g2476 830 Gene3D - 208 248 - -
Ssu7g2476 830 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 14 826 - -
Ssu7g2476 830 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 14 826 IPR023610 -
Ssu7g2476 830 CDD PIPKc_AtPIP5K_like 410 822 - -
Ssu7g2476 830 SMART morn 107 128 IPR003409 -
Ssu7g2476 830 SMART morn 153 174 IPR003409 -
Ssu7g2476 830 SMART morn 176 197 IPR003409 -
Ssu7g2476 830 SMART morn 61 82 IPR003409 -
Ssu7g2476 830 SMART morn 84 105 IPR003409 -
Ssu7g2476 830 SMART morn 130 151 IPR003409 -
Ssu7g2476 830 SMART morn 199 220 IPR003409 -
Ssu7g2476 830 SMART morn 222 243 IPR003409 -
Ssu7g2476 830 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 396 578 IPR027484 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2476 Ssu-Chr7 48257136 48263827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2476 10 824 Acyl Lipid Metabolism Gene Families AT3G09920 74.847 0.0 1266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2476 K00889 - gmx:100805371 1573.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2476 7 48257136 48263827 Ssu7g2476 7 48257136 48263827 ECH
Ssu4g0968 4 15426244 15432241 Ssu7g2476 7 48257136 48263827 PCT