Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0968 ATGAGAAATGGGTATGGAAAAATAAGATGGCCTTCTGGAGCAGTGTATGAAGGTGATTTCTCTGGTGGTTATATCCATGGTACGGGAACATATAGTCGTTCTGATAAATTGACCTATAAAGGTAGGTGGTGGTTGAATCTTAAACATGGTTTGGGGTATCAAGTTTATCCTAATGGAGATACCTTTGAAGGGTCTTGGATGCAAGGAACACCAGAGGGACCTGGCAAGTATACCTGGACCAATGGAAATGTGTTTGTGGGGAATATGAAAGGTGGGATAATGTCAGGAAAAGGAACTCTCACATGGATAAATGGGGACTCATATGAAGGAAACTGGTTAAATGGCGTGATGCATGGGTTTGGAGTGTATACTTGGAGTGATGGAGGATGCTATGTTGGGACTTGGACATTTGGTCTAAAAGATGGCAACGGAACCTTTTATCCGAAAGGTAGCCGTCTTCCATCAGTGCAAGAAATTTACCTCAGTGCCTTGAGAAAAAGAGGGCTGTTGCCAGATTTGAGAAAACAGAACCAGGTGAGAGATGTCAAGGTACCAGAAAACCAGATGTCAAGTCATGTTTCATCTGATAAGCTTGCAAAAAGAAACCTGTTGAATCTGGAGCAGTCTAATAGAAGAAATGTTTCTCTAGAAAGGCGCTGGAGTCTTGAGGTGTCTATTGAGAAAGTGATTGGATATGATTCAGCATTAGGATTGGCAGAATCTGTGCCAGAAAGTAGAGACAAAGAGGATGATGAAATGATCCTAATTTTGGAACGAGAGTACATGCAAGGTGTATTGATAAGTGAGGTAgtgttaaataatatgttttcatcAATGTCTAGAAGGGCACGGCGACTTCAAAAAAAGCTTGCCAAAGAGATTAAAAGACCTGGTGAAGCAATCATTAAAGGTCACCGGAGTTATGATCTGATGCTCAGTTTGCAGCTTGGAATAAGGTATACTGTGGGCAAGATAACACCTATACCAACGCGAGAAGTTAGAGCATCAGATTTTGGTCCCAAAGCAAGCTTTTGGACGAATTTTCCTAAAGAAGGTTCTCAATTAACACCTACTCATCAATCAGAGGATTTTAAATGCAAAGATTATTGCCCCATGTTATTCAGAAATTTGAGAGAGTTGTTCAAGATTGACGCTGCCGACTACATGATGTCCATTTGTGGAAACGATGCTCTGAGGGAACTGTCTTCTCCGGGGAAAAGTGGCAGTGTCTTCTTCCTGTCTCAGGATGATCGTTTCATGATCAAGACGCTGCGAAGATCTGAAGTCAAGGTTCTTCTAAGAATGCTTCCAGACTATCATCATCATGTGAAGTCATATGAAAATACACTTATCACAAAATTTTTTGGCCTGCACAGGATTAAACCTTCAAGTAGTCAAAAGTTTCGCTTTGTTGTAATGGGAAATATGTTCTGTACGGAATTAAGGATCCATCGGAGATTTGATTTAAAAGGGTCGTCCTTTGGACGATCATCAGACAAGATAGAAATTGATGAGAATACCACACTCAAAGATTTGGATCTGAACTACTGCTTCTACTTGGAACCGTCTTGGCGGGAGTCTTTATTAAAGCAGATTGAAATAGACAGCAAATTTTTGGAAGCACAGCACATTATGGATTACAGTCTTCTTCTAGGTGTTCACCATCGAGCTCCCCAGCATCTGCGTCCCCTCATATCATACGACCAAAGTAGAAACGTGGATGGATTAGCAATGCTTGCAGAGGAAGACCCTCTGGAGGATGAAGTATCCCATCCACAAGGCCTTGTTCTAGTTCCTCGAGGAGCAGACGATAACAGTGTTGTTGTTGGCTCACACATGAGGGGTAGCCGGTTGCGAGCTTCATCTGCTGGGGATGAGGAGGTGGATCTACTTCTACCTGGGACAGCAAGACTCCAAATCCAGCTTGGGGGGAACATACCATCAAGGGCAGAGCAGATTCCAGGAAAACGAGAAAAGCAGATGTTCCATGAGGCGTACGATGTCGTATTGTACCTGGGTATCATTGACATATTGCAGGACTACAACATGACTAAGAAGATTGAACATGCTTATAAATCACTTCAGTTTGACTCATTGTCTATCTCAGCTGTGGACCCTACTTTCTACTATCGTCGCTTCCTGGAATTTATTCAGAAAGTGTTTCCACCAAATGCAATGACAGGTTAA 2187 0.4198 MRNGYGKIRWPSGAVYEGDFSGGYIHGTGTYSRSDKLTYKGRWWLNLKHGLGYQVYPNGDTFEGSWMQGTPEGPGKYTWTNGNVFVGNMKGGIMSGKGTLTWINGDSYEGNWLNGVMHGFGVYTWSDGGCYVGTWTFGLKDGNGTFYPKGSRLPSVQEIYLSALRKRGLLPDLRKQNQVRDVKVPENQMSSHVSSDKLAKRNLLNLEQSNRRNVSLERRWSLEVSIEKVIGYDSALGLAESVPESRDKEDDEMILILEREYMQGVLISEVVLNNMFSSMSRRARRLQKKLAKEIKRPGEAIIKGHRSYDLMLSLQLGIRYTVGKITPIPTREVRASDFGPKASFWTNFPKEGSQLTPTHQSEDFKCKDYCPMLFRNLRELFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRRSEVKVLLRMLPDYHHHVKSYENTLITKFFGLHRIKPSSSQKFRFVVMGNMFCTELRIHRRFDLKGSSFGRSSDKIEIDENTTLKDLDLNYCFYLEPSWRESLLKQIEIDSKFLEAQHIMDYSLLLGVHHRAPQHLRPLISYDQSRNVDGLAMLAEEDPLEDEVSHPQGLVLVPRGADDNSVVVGSHMRGSRLRASSAGDEEVDLLLPGTARLQIQLGGNIPSRAEQIPGKREKQMFHEAYDVVLYLGIIDILQDYNMTKKIEHAYKSLQFDSLSISAVDPTFYYRRFLEFIQKVFPPNAMTG 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0968 728 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 393 719 IPR002498 GO:0016307|GO:0046488
Ssu4g0968 728 SUPERFAMILY SAICAR synthase-like 303 721 - -
Ssu4g0968 728 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 293 475 IPR027484 -
Ssu4g0968 728 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1 725 IPR023610 -
Ssu4g0968 728 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 66 151 - -
Ssu4g0968 728 CDD PIPKc_AtPIP5K_like 307 720 - -
Ssu4g0968 728 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 1 725 - -
Ssu4g0968 728 SMART PIPK_2 334 722 IPR002498 GO:0016307|GO:0046488
Ssu4g0968 728 Gene3D - 114 156 - -
Ssu4g0968 728 Gene3D - 64 113 - -
Ssu4g0968 728 Pfam MORN repeat 16 35 IPR003409 -
Ssu4g0968 728 Pfam MORN repeat 1 14 IPR003409 -
Ssu4g0968 728 Pfam MORN repeat 62 84 IPR003409 -
Ssu4g0968 728 Pfam MORN repeat 108 129 IPR003409 -
Ssu4g0968 728 Pfam MORN repeat 85 106 IPR003409 -
Ssu4g0968 728 Pfam MORN repeat 39 61 IPR003409 -
Ssu4g0968 728 Pfam MORN repeat 131 152 IPR003409 -
Ssu4g0968 728 SMART morn 106 127 IPR003409 -
Ssu4g0968 728 SMART morn 129 150 IPR003409 -
Ssu4g0968 728 SMART morn 83 104 IPR003409 -
Ssu4g0968 728 SMART morn 60 81 IPR003409 -
Ssu4g0968 728 SMART morn 14 35 IPR003409 -
Ssu4g0968 728 SMART morn 37 58 IPR003409 -
Ssu4g0968 728 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 304 721 IPR002498 GO:0016307|GO:0046488
Ssu4g0968 728 Gene3D - 476 721 - -
Ssu4g0968 728 PIRSF PIP5K_plant 1 725 IPR017163 GO:0005524|GO:0016308
Ssu4g0968 728 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 2 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0968 Ssu-Chr4 15426244 15432241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0968 1 724 Acyl Lipid Metabolism Gene Families AT3G09920 74.110 0.0 1108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0968 K00889 - gmx:100800418 1358.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0968 4 15426244 15432241 Ssu4g0968 4 15426244 15432241 ECH
Ssu4g0968 4 15426244 15432241 Ssu7g2476 7 48257136 48263827 PCT