Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2470 ATGCAATCTCCCATAGACTTGTCATGTGCCAGAGTCAAAATGATCCCTTACTGTCGCCGACTCAAGACCAATTACAAATCTTCTAATGCCACTATCGTCAACAGAGGCCATGATATTGCGGTATATTGGAAGGATGATGCTGGCTCAATACGCATCAATGGAACCAAATTCTTTCTGAAACAATGTCATTGGCACTCTCCTTCAGAACATTCCATCAATGGCAGGAAGTATGACTTAGAGATGCACATGGTGCATGTAAGTCCGGACAACAAGATTTTTGTGGTTGGTGCTTTCTATGAGATTGGTCATCGCCCCGATCGTTTCCTCTATAAGTTGGAGGAAGACATAAAGCACatggttgatgaagaaggagaaagagtAATTGGAGAGACAAATCCCTCACAAATTCAGACAAGAGGCAAAATGTATTACAGATACGTAGGCTCACTCACCACTCCTCCTTGCACTGAAGGTGTCATCTGGAACATTGATAGAAAGATAAGGACAGTTTCGGAAGAGCAAGTAAGGCTTTTGAAGGAAGCAGTGCATGACATGATAATTGAGTTGCACAAGCACTTTCAACTTATTGTTTTAGCTGTGGCCAACTTTGTAGCATGCAGAGATGAATGCAAGGCCAAGGCAGCCACGTAA 651 0.4132 MQSPIDLSCARVKMIPYCRRLKTNYKSSNATIVNRGHDIAVYWKDDAGSIRINGTKFFLKQCHWHSPSEHSINGRKYDLEMHMVHVSPDNKIFVVGAFYEIGHRPDRFLYKLEEDIKHMVDEEGERVIGETNPSQIQTRGKMYYRYVGSLTTPPCTEGVIWNIDRKIRTVSEEQVRLLKEAVHDMIIELHKHFQLIVLAVANFVACRDECKAKAAT 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2470 216 PANTHER EUKARYOTIC-TYPE CARBONIC ANHYDRASE 1 185 - -
Ssu7g2470 216 SUPERFAMILY Carbonic anhydrase 1 184 IPR036398 -
Ssu7g2470 216 Gene3D Alpha carbonic anhydrase 1 202 IPR036398 -
Ssu7g2470 216 SMART Carb_anhydrase_2a 1 201 IPR001148 -
Ssu7g2470 216 ProSitePatterns Alpha-carbonic anhydrases signature. 68 84 IPR018338 GO:0004089|GO:0008270
Ssu7g2470 216 ProSiteProfiles Alpha-carbonic anhydrases profile. 1 216 IPR001148 -
Ssu7g2470 216 PANTHER CARBONIC ANHYDRASE 1 185 IPR023561 GO:0004089|GO:0008270
Ssu7g2470 216 CDD alpha_CA_prokaryotic_like 1 185 IPR041891 -
Ssu7g2470 216 Pfam Eukaryotic-type carbonic anhydrase 2 183 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2470 Ssu-Chr7 48182017 48183944 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2470 K01674 - gmx:100784540 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2470 7 48182017 48183944 Ssu4g0974 4 15582114 15583591 PCT