Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2469 ATGAAGCATCAAATCAGGCTTAGAGTGTTTCTTCCGAATTTGCTAATACTACTAGCCATCCTACTCCATTCAACTACATGGATTAGTGCACAGGAAGTTGAGGATGAGAGTGAGTTTGATTACATAAAAGGAAGTGAGAAGGGTCCCTCACACTGGGGGGAACTGAAGAAGGAATGGGCAACATGTAAAAGTGGCACCATGCAATCTCCCATTGATTTGTCAAGCCACCGAGTAAGAGTGGTGCCAAAGTTAGGGGAGCTAAAGAAGTACTATAAGCCTCAGAATGCCACTGTCAAGAACAGAGGCCATGATATTGAGCTGAAATGGGAGGGAGATGCGGGATCAATAGACATCAATGGCACCGAGTTTTTTCTGCATCAATGCCATTGGCACTCACCTTCAGAACATACCATCAATGGCAGAAGGTATGATTTGGAGCTCCACATGGTTCATGAAAGCAAAAGCACAAACGGAAAAAACAAAACTGCTGTTGTTGGACTTCTGTATAAGATTGGTCGGCCCGATCCTGTTCTCAACAAGTtgtcaaaattcataaaatccaTGGTGGATGAAGAAGCAGAAAGGAGCATTGGGGTGATTGATCCCTCAGAAATTAAGTTGGGTGGCAAGAAGTACTACAGATACATGGGATCCCTCACCGTCCCTCCTTGTACTGAAGGTGTCATTTGgactataaataaaaagATAAGAAGTGTGTCAAGGGCGCAAGTCAAGTTACTTAGAGAGGCTGTCCACGATCACGCAGAGAGGAATGCGAGGCCCGCACAACCCCTGAATAGACGAGGGATACAACTATATAGTCCAAAAAGGAAGGAGTAA 840 0.4333 MKHQIRLRVFLPNLLILLAILLHSTTWISAQEVEDESEFDYIKGSEKGPSHWGELKKEWATCKSGTMQSPIDLSSHRVRVVPKLGELKKYYKPQNATVKNRGHDIELKWEGDAGSIDINGTEFFLHQCHWHSPSEHTINGRRYDLELHMVHESKSTNGKNKTAVVGLLYKIGRPDPVLNKLSKFIKSMVDEEAERSIGVIDPSEIKLGGKKYYRYMGSLTVPPCTEGVIWTINKKIRSVSRAQVKLLREAVHDHAERNARPAQPLNRRGIQLYSPKRKE 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2469 279 SMART Carb_anhydrase_2a 41 274 IPR001148 -
Ssu7g2469 279 Pfam Eukaryotic-type carbonic anhydrase 48 271 IPR001148 -
Ssu7g2469 279 MobiDBLite consensus disorder prediction 255 279 - -
Ssu7g2469 279 CDD alpha_CA_prokaryotic_like 48 272 IPR041891 -
Ssu7g2469 279 SUPERFAMILY Carbonic anhydrase 38 270 IPR036398 -
Ssu7g2469 279 ProSitePatterns Alpha-carbonic anhydrases signature. 134 150 IPR018338 GO:0004089|GO:0008270
Ssu7g2469 279 ProSiteProfiles Alpha-carbonic anhydrases profile. 37 274 IPR001148 -
Ssu7g2469 279 PANTHER CARBONIC ANHYDRASE 13 277 IPR023561 GO:0004089|GO:0008270
Ssu7g2469 279 Gene3D Alpha carbonic anhydrase 35 278 IPR036398 -
Ssu7g2469 279 PANTHER ALPHA CARBONIC ANHYDRASE 3 13 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2469 Ssu-Chr7 48156798 48159948 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2469 K01674 - gmx:100797935 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2469 7 48156798 48159948 Ssu7g2469 7 48156798 48159948 ECH
Ssu4g0974 4 15582114 15583591 Ssu7g2469 7 48156798 48159948 PCT