Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2462 ATGGGTATACTGTACGACGACGTAGTGATCATAAGGCAGCCAGAAAAAGACGGTGACCCAACAGTTATCACGGTGAATTGCCCTGACAAAACCGGTTTGGGCTGCGATTTGTGTCGCATCATACTCTTCTTTGGCCTCAACATAGTCAGAGGAGACGTGTCAACCGACGGGAAATGGTGCTACATAGTTTTCTGGGTGGTTGGGAAACAGAGGACGAGGTGGAGTTTGTTGAAGAAGAGGCTGGTTGGGGCATGCCCTTCTTGCTCCTCGGCTTCTGGAATCTCTTACTACTGTTCTGAGTTGCAGCCATCGAAGCCTCCtgatgtttttcttttgaatttttgttgtcACGATCGGAAAGGGCTGTTGCATGATGTTACTGAGGTTCTTTGTGAACTAGAACTTACTATAAAGAAAGTGAAGGTATCTACTACACCTGATGGCAAAGTGATAGATCTGTTTTTCATCACAGATACCAGGGAACTTCTGCAtacaaagaagagaaaggaTGAAACAATGGAACGCTTAACAGAGATTTTGGGGGATGCCATCATATCTATTGACATTGAGTTGGTTGGCCCGGAAATTACAGCTTGTTCCCAGGCATCTCCATTCCTTCCAACTGCAATCACAGAAGATGTCTTTAATTTGGAATTGCCTGATCTGTCTCAAAGCGGAACTCTCAGTTCAGATTATGTTTCTATCACGATGGACAACTTGCTTAGTCCTGCTCACACCCTTGTCCAAATTATGTGCCAAGACCACAAAGGTCTTCTTTATGACATCATGAGAACTCTGAAGGACTACAACATTCAGGCTGATTGTCTTTGTTTTTCTAAGCTTCATGAACACTGCCATGCACATACTTTCTTAGTCATCTTTAGTATCCTAAGGGTACAACCTATTTGTCATTCAACCAGATTTCTTATGGGCGTTTCACTACCAAACCTAGAGGAAAATGTGAGCTTGACTTGTTCATCATGCAAGCAGATGGCAAAAAGATAG 1005 0.4189 MGILYDDVVIIRQPEKDGDPTVITVNCPDKTGLGCDLCRIILFFGLNIVRGDVSTDGKWCYIVFWVVGKQRTRWSLLKKRLVGACPSCSSASGISYYCSELQPSKPPDVFLLNFCCHDRKGLLHDVTEVLCELELTIKKVKVSTTPDGKVIDLFFITDTRELLHTKKRKDETMERLTEILGDAIISIDIELVGPEITACSQASPFLPTAITEDVFNLELPDLSQSGTLSSDYVSITMDNLLSPAHTLVQIMCQDHKGLLYDIMRTLKDYNIQADCLCFSKLHEHCHAHTFLVIFSILRVQPICHSTRFLMGVSLPNLEENVSLTCSSCKQMAKR 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2462 334 Gene3D - 108 192 - -
Ssu7g2462 334 SUPERFAMILY ACT-like 107 177 IPR045865 -
Ssu7g2462 334 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Ssu7g2462 334 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 291 IPR040217 -
Ssu7g2462 334 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 2 291 - -
Ssu7g2462 334 SUPERFAMILY ACT-like 19 81 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2462 Ssu-Chr7 48021322 48023784 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2462 - - gmx:100816138 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2462 7 48021322 48023784 Ssu7g2462 7 48021322 48023784 ECH
Ssu4g0984 4 15684540 15687000 Ssu7g2462 7 48021322 48023784 PCT