Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2350 ATGGCGGCCATAACCCGCCTCGCGAAGCGCGCGTCTTTTTCCGTTTCTCCCCTGGCGAGGAGATTCCTGACCTCCTCGGAAGTTACCTCTCGCGCGCCGCCGCACGACGCCGCGCCGTTCAGCCTGTTTCCGCCGCGCGAAGATCCGAGCAGCAGACGCGTGCAGTGGGTGTTCCTGGGCTGCCCCGGCGTCGGAAAGGGCACGTACGCTAGCCGCCTCTCCAACCTCCTCGGCGTCCCTCACATCGCCACCGGCGATCTCGTTCGCGACGAACTCGCCTCCTCTGGCCCCCTTTCTTCCCAGCTATCAGACATTGTAAAACAAGGTCAATTGGTGTCAGATgagattattataaatttattgacacaGAGACTTATTGCTGGGGAAGCTAAAGGCGAATTGGGATTTATTCTTGATGGTTTTCCTCGAACAATAAAGCAAGCAGAAATATTGGAAGGGGTAACTGACATTGACTTGGTAATCAATCTGAAGCTCCGAGAAGATGTTCTGCTTGAGAAATGCCTTGGTAGGAGAATTTGCAATCAGTGTGGGGGTAATTTTAATGTTGCCTCCATTGACATCAAGGCTGAGAATGGGAGCCCTGGAATTATTATGGCTCCACTTCTTCCTCCTGCGAATTGTATGTCAAAGCTCATTACTCGATCAGATGATACTGAAGCAGTGGTCAAAGAAAGGCttcgaatatacaatgaaatgACTCAGCCTGTGGAGGAATTTTACCGTAGAAGAGGAAAATTATTGGAGTTTAACCTGCCTGGAGGAATCCCGGAATCTTGGCCTAAGTTGCTACAAGCTCTTAATCTTGATGATTATGAGGACAAGCGATCTGCTGCAGCATAA 861 0.4878 MAAITRLAKRASFSVSPLARRFLTSSEVTSRAPPHDAAPFSLFPPREDPSSRRVQWVFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLSDIVKQGQLVSDEIIINLLTQRLIAGEAKGELGFILDGFPRTIKQAEILEGVTDIDLVINLKLREDVLLEKCLGRRICNQCGGNFNVASIDIKAENGSPGIIMAPLLPPANCMSKLITRSDDTEAVVKERLRIYNEMTQPVEEFYRRRGKLLEFNLPGGIPESWPKLLQALNLDDYEDKRSAAA 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2350 286 CDD ADK 55 257 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu7g2350 286 Pfam Adenylate kinase 59 251 - -
Ssu7g2350 286 TIGRFAM adk: adenylate kinase 55 274 IPR006259 GO:0004017|GO:0005524|GO:0016776
Ssu7g2350 286 Hamap Adenylate kinase [adk]. 54 274 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu7g2350 286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 274 IPR027417 -
Ssu7g2350 286 Gene3D - 45 277 IPR027417 -
Ssu7g2350 286 ProSitePatterns Adenylate kinase signature. 136 147 IPR033690 -
Ssu7g2350 286 PRINTS Adenylate kinase signature 85 99 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu7g2350 286 PRINTS Adenylate kinase signature 238 252 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu7g2350 286 PRINTS Adenylate kinase signature 221 236 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu7g2350 286 PRINTS Adenylate kinase signature 57 70 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu7g2350 286 PRINTS Adenylate kinase signature 136 152 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu7g2350 286 PANTHER NUCLEOTIDE KINASE 1 286 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu7g2350 286 PANTHER ADENYLATE KINASE 1 286 - -
Ssu7g2350 286 MobiDBLite consensus disorder prediction 30 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2350 Ssu-Chr7 46167350 46170653 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2350 K00939 - gmx:100777619 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1066 4 16997468 16999233 Ssu7g2350 7 46167350 46170653 PCT