Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1066 ATGGCGGCGATAACCAGCCTCGTAAAGCGTACCCCCTCCCTCTCTTGCGCGGCGCGTAGATTCTCATCCCACCCCCGCCGCGCGAGGACAGGAACGTCCAGTGGGTGTTCCTGGGGTGCCCCGGCGTCGGAAAAGGCACCTACGCGAGCCGCCTCTGCAACCTCCTCGGCGTCCCTCACATCGCCACCGGCGATCTCGTCCGCCACGAGCTCGCCTCCAACGGCCCCCTTTCTCCCCAGCGTGAATGTGATTGGAATTTTCACCATTCTTGATCTCGTTTTTGAGCTGTCAGAAATTGTTAATCAAGGTAAATTGGTGTCTGATGAAATCATCATAAGTTTATTGTCTAAGAGGCTGGCTGATGGGGAAGCTAAAGGCGAATCGGGATTTATTCTTGATGGTTTTCCTCGAACAATGAAGCAAGCAGAAATATTGGAAGGGGTAACTGACATTGACTTGGTGGTCAATCTAAAGCTCCAAGAAGAAGCACTGCTAGCAAAATGCCTTGGTAGAAGAATTTGCAATCAATGTGGAGGGAATTTTAATGTTGCCTCCATTAGCATCAAGGGTGAGAATGGGCACCCTGGAATGGTCATGGCTCCACTTCTTCCTCCTGCACATTGTATGTCAAAGCTCATTACTCGTTCAGATGATACTGAAGTAGTAGTCAAAGAAAGGCTTCGTATATACAATGAAAAGAGTCAGCCTGTGGAGGAATTTTACCGTAGTAGAGGAAAACTGTTGGAGTTTGACCTGCCAGGAGGGATCCCAGAATCTTGGCCTAAGTTGCTGCAAGCACTTAATCTTGATGATTATGAGGAGAAGCAATCTGCTGCAGCATAA 843 0.4911 MAAITSLVKRTPSLSCAARRFSSHPRRARTGTSSGCSWGAPASEKAPTRAASATSSASLTSPPAISSATSSPPTAPFLPSVNVIGIFTILDLVFELSEIVNQGKLVSDEIIISLLSKRLADGEAKGESGFILDGFPRTMKQAEILEGVTDIDLVVNLKLQEEALLAKCLGRRICNQCGGNFNVASISIKGENGHPGMVMAPLLPPAHCMSKLITRSDDTEVVVKERLRIYNEKSQPVEEFYRSRGKLLEFDLPGGIPESWPKLLQALNLDDYEEKQSAAA 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1066 280 Pfam Adenylate kinase 95 245 - -
Ssu4g1066 280 Gene3D - 69 269 IPR027417 -
Ssu4g1066 280 PANTHER NUCLEOTIDE KINASE 93 280 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu4g1066 280 ProSitePatterns Adenylate kinase signature. 130 141 IPR033690 -
Ssu4g1066 280 MobiDBLite consensus disorder prediction 48 72 - -
Ssu4g1066 280 MobiDBLite consensus disorder prediction 19 72 - -
Ssu4g1066 280 Hamap Adenylate kinase [adk]. 81 268 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu4g1066 280 CDD ADK 95 251 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu4g1066 280 PANTHER ADENYLATE KINASE 93 280 - -
Ssu4g1066 280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 268 IPR027417 -
Ssu4g1066 280 PRINTS Adenylate kinase signature 232 246 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu4g1066 280 PRINTS Adenylate kinase signature 130 146 IPR000850 GO:0005524|GO:0006139|GO:0019205
Ssu4g1066 280 PRINTS Adenylate kinase signature 215 230 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1066 Ssu-Chr4 16997468 16999233 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1066 K00939 - gmx:102666238 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1066 4 16997468 16999233 Ssu4g1066 4 16997468 16999233 ECH
Ssu4g1066 4 16997468 16999233 Ssu7g2350 7 46167350 46170653 PCT