Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2334 ATGGGCAAAACCGCCTTCACCACCGGCGTCTTcgctctcctcctcctcctcctggTGTGCCCCTCGAGGGCGGAGATCAAAACCCTGACCATCACCTCCGACACCCGGGCCATGATCCTGTTGGAGAAATTCGGGTTCACCCACACCGGCCACGTGTCGATCGCGGTGTCGTCGGTGTCCGTGGTGACGGCGTCGCAATCGCAACCGGACCCGTCCCGTCTGGGCTTCTTCCTCCTGAGCGAAGAGTCCCTCCTCCAAGTCCTAATCGAGATCCAGCAAAACCCTAGCTTCTGCGTCCTGGACTCCCGCTACACGACGCACCTCTTCACGTTCCGCGACCTCTCCCCCCCTCCGGCCGCCTCCGCCAACCACACCTACCCCGTGACCATCCCCAACGAATACAGCCTCTTCTTCGCCAACTGCGCCCCGGAGACCACCGTCTCTATGTCCCTGCACACGGAGCTCTACAACCTCGACGGCGACTCACCCGACTTCCTCTCCGCCGGCCAGACCCAGCTCCCCACCCTCTTCTCCCTCTTCTCCGTCGCCTACTTCGCCTTCCTCGCCATCTGGCTCCACCTCTGCCACTCCAACAGGCGCTCCCTCCACCGGATCCACCTCCTCATGGCCGCGCTCCTCCTCATGAAGGCCCTCAACCTCCTCTGCGCCGCCGAGGACAAGCACTTCGTCAAAGTCAGCGGCACCCCCCACGGCTGGGACGTCCTCTTCTACATCTTCCAGTTCATCCGCGTCGTTTTGCTCTTCACCGTCATCGTTTTGGTCGGCACCGGCTGGTCCTTCCTCAAACCCTTCCTCCAGGAGCGCGAAAAGAAGGTCCTCATGATAGTCATCCCTCTTCAAGTCCTCGCCAACATCGCCTCCGTCGTTATCGGCGAAACAGGACCCTTCATCAAGGATTGGGTCACCTGGAACCAGGTCTTCTTGCTCGTGGATATTATCTGCTGCTGCGCCATCATTTTCCCCATCGTGTGGTCCATTAGGTCGCTCAGGGAAACCTCCAAGACCGACGGGAAGGCCGCGAGAAACTTGGCCAAGTTGACCCTGTTCAGGCAGTTCTACATCGTTGTCATTGGCTACCTCTACTTCACGCGCATTGTGGTGTTTGCGTTGAAGACCATTGCCGCCTATAAGTACCAGTGGGTGAGTAATCTCGCCGAGGAGACTGCTAGTCTCGCGTTTTATGTTGTCATGTTCTATATGTTTAGGCCTGTGGAGAGGAATGAGTACTTTGTGCTCGatgaggaggaagaagaggCCGCCGAGATCGCACTCAGGGATGAAGAATTTGAACTTTGA 1317 0.5657 MGKTAFTTGVFALLLLLLVCPSRAEIKTLTITSDTRAMILLEKFGFTHTGHVSIAVSSVSVVTASQSQPDPSRLGFFLLSEESLLQVLIEIQQNPSFCVLDSRYTTHLFTFRDLSPPPAASANHTYPVTIPNEYSLFFANCAPETTVSMSLHTELYNLDGDSPDFLSAGQTQLPTLFSLFSVAYFAFLAIWLHLCHSNRRSLHRIHLLMAALLLMKALNLLCAAEDKHFVKVSGTPHGWDVLFYIFQFIRVVLLFTVIVLVGTGWSFLKPFLQEREKKVLMIVIPLQVLANIASVVIGETGPFIKDWVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIGYLYFTRIVVFALKTIAAYKYQWVSNLAEETASLAFYVVMFYMFRPVERNEYFVLDEEEEEAAEIALRDEEFEL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2334 438 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR FAMILY PROTEIN 6 437 - -
Ssu7g2334 438 Pfam Lung seven transmembrane receptor 134 414 IPR009637 GO:0016021
Ssu7g2334 438 Coils Coil 419 438 - -
Ssu7g2334 438 Gene3D MFS general substrate transporter like domains 145 413 IPR036259 -
Ssu7g2334 438 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 6 437 IPR009637 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2334 Ssu-Chr7 45911417 45912733 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2334 K22985 - gmx:100815429 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1089 4 17308972 17310183 Ssu7g2334 7 45911417 45912733 PCT