Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1089 ATGATCCTGTTCGAGAAATTCGGGTTCACGCACAAGGGCCACGTGTCGATCGCCGTGTCGTCGGTGTCGGTGGGGGTGCTCTCCTCGGCGGTGCAGCCGGAATCGTCGCGCCTGGGCTTCTTCCTCCTCAACGAGGAATCCCTCCTCCAGGTCCTAATGGAGATCCAGCAGAACCCCTCGTTCTGCGTCCTCGACTCCCACTACGTCCTCCTCCTCTTCACCTTCCGCGACCTCTCCCCGCCCCCACTCGCATCCTTCAACCGTTCCTACCCCGTCACCGCCCCCAACGAGTACAGCCTCTTCTTCGCCAACTGCGCCCCGGAGACCTACGTCACGATGGCCGTCCACACGGAGGCCTACAACCTCGACTCCGACGGTTCCAGAGACTTCCTCTCCGCCGGTCAGACTCAGCTCCCCGCTCTCTATTTCCTCTTCTCAGTTGTCTACCTCGCTTTCTTCGCTTTCTGGCTCTACGTCTGCCACGCCAACAGGCGCTCCGTTCACCGCATTCACCTCCTCATGGCGCTGTTGCTCCTTATGAAGGCTTTGAATTTAATCTGCGCCGCGGAGGACAAGCATTACGTGAAGGTCACGGGTCTCCCTCACGGATGGGATGTGTTGTTTTATATCTTCCAGTTCATCCGCGTCGTTTTGCTCTTCACCGTCATCGTTTTGATAGGGACCGGCTGGTCTTTTCTGAAACCCTTCTTGCAGGACAGGGAGAAGAAGGTGTTGATGATTGTCATCCCGCTTCAGGTCTTGGCTAACTTGGCTTCCGTCGTGATCGGGGAGACTGGGCCTTTTATTAAGGACTGGGTTACTTGGAATCAGGTGTTTTTGCTTGTGGATATTATCTGCTGTTGTGCTATTATTTTCCCTATTGTTTGGTCGATAAGATCGTTGAGAGAGACGTCCAAAACGGACGGCAAAGCTTCCAGGAATCTGGCGAAGTTGACGCTCTTCAGgcagttttatattgttgttattgGGTACTTGTATTTCACCAGAATAGTGGTGTTTGCGTTGAGGACTATTGCTGCTTACAAGTACCAATGGGTGAGTAATGCTGCGGAGGAGACTGCTAATCTTGCGTTTTATGTTGTGATGTTCTACATGTTTAGACCTGTGGAGAGGAATGAGTATTTTGTGCTTGAtgaggaggaagaggaggcCGCGGAAATGGCTCTCAAGGATGAAGAGTTTGAGCTTTGA 1212 0.514 MILFEKFGFTHKGHVSIAVSSVSVGVLSSAVQPESSRLGFFLLNEESLLQVLMEIQQNPSFCVLDSHYVLLLFTFRDLSPPPLASFNRSYPVTAPNEYSLFFANCAPETYVTMAVHTEAYNLDSDGSRDFLSAGQTQLPALYFLFSVVYLAFFAFWLYVCHANRRSVHRIHLLMALLLLMKALNLICAAEDKHYVKVTGLPHGWDVLFYIFQFIRVVLLFTVIVLIGTGWSFLKPFLQDREKKVLMIVIPLQVLANLASVVIGETGPFIKDWVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKASRNLAKLTLFRQFYIVVIGYLYFTRIVVFALRTIAAYKYQWVSNAAEETANLAFYVVMFYMFRPVERNEYFVLDEEEEEAAEMALKDEEFEL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1089 403 Pfam Lung seven transmembrane receptor 98 379 IPR009637 GO:0016021
Ssu4g1089 403 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 1 402 IPR009637 GO:0016021
Ssu4g1089 403 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR FAMILY PROTEIN 1 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1089 Ssu-Chr4 17308972 17310183 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1089 K22985 - gmx:100811083 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1089 4 17308972 17310183 Ssu4g1089 4 17308972 17310183 ECH
Ssu4g1089 4 17308972 17310183 Ssu7g2334 7 45911417 45912733 PCT