Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2333 atgaatgtggtAGGCAAAGTTGGAAGCTTCATAAGTCAAGGTGTGTACTCAGTTGCTACCCCTTTCCACCCCTTTGGTGGGGCAGTTGATGTGATTGTTGTTCAGCAACAAGATGGAACATTTCGAAGCACCCCTTGGTATGTTCGGTTTGGTAAATTTCAGGGTGTTCTCAAAGGTGCGGAAAAGATTGTTAGGATAAATGTTAATGGTGTTGAAGCCAATTTTCATATGTATCTTGACAATTCGGGGGAGGCGTATTTTTTGAAGGAGGTGGATGATGATAAAGGAGTTGAGTCAATTGAGGTGGGTCAAGATTCTAGTGACAAAAAGAATAGCTATTTGAGTAATGGTCATAGACTTGATCATAGCATCTCGGATTCTGGGGTGCTTCGGTTGAAAGATGAGGGTAATTCCTCAGTTGTGCCTCGAATTCAAAGGGCAGAATCTGATGTTGATAGGAGATTTTATGAATTCCCAGATGATCGATCTTCTTTTGATGGTTCAGTTGAGTTGTCAGAATATGAGTCTAATTCATATGAGAGCCTAGAGGGAGACAATTTTGTGGAGTCACAGGGTGCACATCCAGAGATGGTATTGGTGAGTGTTGACGGTCATATATTGACGGCCCCTATCTCAGAATCAGAGCAGACTGAGGAAAATGTGCAGTTAAAAACTCCTCAATTTCATCTAGGACCAGGTGAAGAGACCGACTTATGTGAAGGCAATGGAGAGTTTAGTACTGGTGAAAATGCTTGGGCTGCTGATTATATTAGTCAGCTGGGTGCTCAAACTACTGATGTCCAACCCAGACGATGCGACACTAATGGTGATGATAACATTTCTAAGCTCTCACTTGAAGTTTGTCAAGGAGAGGAGGTACATATTTGTCAAGCACAGGAAACCTTGGAGATTAAAAATCAAGAAGATCATATGAAAACTGATTCAGAAGGGGTTGCATCAGGTATCAAGAGGGAGAATGTTTTCAAAAGCTGTTTGGAGCTACAAGATTTTGGTCAGCAGGCTGGAAATGCCGATTTACTAGATACAGGTTCATCATTGGAGATTCAAAATTCAGCTGAGGAATCTAATTCAAGTTGTCCTgtagttgatgaaaatgaacAAGAGATCATTGTACAATCTAAAAACAGTGATGAGTTATCACCTCCTAGTGGTTCTACTTCTTCTAATGGCCATATATCTCCAAAATCAGAATTAGAAATTCAAGAGGTTGAGAAAAATGCATTAAGAGAAGTTGAAGCTGCTTCTGGCTCTCATTCTGTTGCTACTGATACTGAACAGAATGATGAACAAGTTGACAAGACAGTATCAAATGATGAGGTAGATGAGAGTCAACAAACCCCTGCACTCAAAGATGTTGGGGCTACAAGTGAGGTAGTGGAACCTCAAacagaaatttcaaataaaggGGATCAAAGCCATTCGGGTTTGGGATTTGATATCTCACTTTGTGGTCATGAACTTAAGGTGGGCATGGGTTCAGTAGCTGCTGCTGAAGTTTTTGAAGCACATCGCATATCGGCGGTTGACTTCACAAGTTCTGCTCCATCAatcattaaaaatcaaaatcttgTTATCAAGTTCAAAGAGAGGTACTTGACGTGGGATAAGGCTGCTCCTCTTGTTCTTGGAATGGCTGCTTTTGCTTTAGATTTACCTATCGAGCCCAAAGATACAATTCCTGTGGAACAAGATCATGCATTGAAGTCCAGGGATGATGATCAGGGATCATCTTCGTCTGGACGCAGATGGAGACTTTGGCCTATTCCTTTTCGAAAGGTCAAAACATTTGAGCATACTAATAGCAACTCAACAAATGAGGAGGTATTTCTAGATTCTGAGTCTGGATCTCTTGTAGACCCAACTTCAACTTCCAGTACCCCGGGATCTCCTCGTAAGcaatttttaagaacaaatgTTCCCACCAATGAGCAGATAGCATCCTTAAATCTCAAAGATGGTCAAAATTTGGTAACCTTCAGTTTCTCTACAAGGGTTCTCGGAACACAACAGGTTGATGctcatatttatttatggaaGTGGAATGCAAGAATTGTAATTTCAGATGTTGATGGAACTATTACCAAgTCTGATGTTTTGGGGCAGTTCATGCCTTTAGTTGGCAAAGATTGGACACAATCTGGAGTGGCAAGGCTTTTCTCTGCCATTAAgGAAAATGGATACCAGTTACTTTTTCTGAGTGCCCGTGCAATTGTCCAGGCATATCTAACCAGAAACTTTTTGCTTAACCTGAAACAGGATGGAAAAACCTTACCAAATGGACCTGTTGTTATCTCACCCGATGGATTATTTCCCTCACTTTACCGAGAAGTGATAAGAAGAGCACCTCATGAGTTCAAGATTGCTTGTTTAGAGGATATCAAAAGACTTTTCCCGTCTGACTATAATCCATTCTATGCGGGATTTGGCAATAGAGATACAGATGAACTTAGTTACAGAAAGATTGGAATCCCGAAgggcaaaatatttattattaacccTAAGGGTGAGGTGGCTATTAGTCACCGTATTGGTGCAAAGTCATATACATCATTACATACCCTCGTCAATGACATGTTTCCACCAACTTCTTTGGTTGAGCAGGAGGACTACAACTCATGGAATTATTGGAAAACGCCATTGCCGGATATTGATTAG 2676 0.3942 MNVVGKVGSFISQGVYSVATPFHPFGGAVDVIVVQQQDGTFRSTPWYVRFGKFQGVLKGAEKIVRINVNGVEANFHMYLDNSGEAYFLKEVDDDKGVESIEVGQDSSDKKNSYLSNGHRLDHSISDSGVLRLKDEGNSSVVPRIQRAESDVDRRFYEFPDDRSSFDGSVELSEYESNSYESLEGDNFVESQGAHPEMVLVSVDGHILTAPISESEQTEENVQLKTPQFHLGPGEETDLCEGNGEFSTGENAWAADYISQLGAQTTDVQPRRCDTNGDDNISKLSLEVCQGEEVHICQAQETLEIKNQEDHMKTDSEGVASGIKRENVFKSCLELQDFGQQAGNADLLDTGSSLEIQNSAEESNSSCPVVDENEQEIIVQSKNSDELSPPSGSTSSNGHISPKSELEIQEVEKNALREVEAASGSHSVATDTEQNDEQVDKTVSNDEVDESQQTPALKDVGATSEVVEPQTEISNKGDQSHSGLGFDISLCGHELKVGMGSVAAAEVFEAHRISAVDFTSSAPSIIKNQNLVIKFKERYLTWDKAAPLVLGMAAFALDLPIEPKDTIPVEQDHALKSRDDDQGSSSSGRRWRLWPIPFRKVKTFEHTNSNSTNEEVFLDSESGSLVDPTSTSSTPGSPRKQFLRTNVPTNEQIASLNLKDGQNLVTFSFSTRVLGTQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRNFLLNLKQDGKTLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKRLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISHRIGAKSYTSLHTLVNDMFPPTSLVEQEDYNSWNYWKTPLPDID 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2333 891 PANTHER LIPIN 1 891 IPR026058 -
Ssu7g2333 891 Pfam LNS2 (Lipin/Ned1/Smp2) 645 867 IPR013209 -
Ssu7g2333 891 MobiDBLite consensus disorder prediction 380 402 - -
Ssu7g2333 891 PANTHER PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 891 - -
Ssu7g2333 891 MobiDBLite consensus disorder prediction 380 403 - -
Ssu7g2333 891 MobiDBLite consensus disorder prediction 611 640 - -
Ssu7g2333 891 SUPERFAMILY HAD-like 683 833 IPR036412 -
Ssu7g2333 891 MobiDBLite consensus disorder prediction 417 464 - -
Ssu7g2333 891 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 486 593 IPR031703 -
Ssu7g2333 891 SMART lns2 691 847 IPR031315 -
Ssu7g2333 891 Pfam lipin, N-terminal conserved region 1 95 IPR007651 -
Ssu7g2333 891 MobiDBLite consensus disorder prediction 432 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2333 Ssu-Chr7 45868276 45875874 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2333 K15728 - gmx:100795884 1582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1090 4 17322444 17328437 Ssu7g2333 7 45868276 45875874 PCT