Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2326 ATGAAACGTATAGATATCTTCTGTGCTTCCCAAGCCTCAACAGCCATATGTCTTAGCACGGATCAAGCCTCATGCTCCTCTTCCAATACCATTCTACTCGGAGGCCGAGCCATTGACCGCCACAACCCCATTATCAATGACTCAAGAAGGAGCACTTCCAAATCTCTCACTGCCCCGTGTTCTTCTTCTCAGTCACCCATCAACCCCAAGCCTTACCATGAGCTCCACAAGGCCAAGAAAAACTCTTCTTCGAAAAGTGCAACAAAGGGTCATGGCCAGAAGAAGAAAAGTACAGCAGAAAAGCTCACTGAACATGTCACCAACACTTCTAAACCAATTGATGGCATCGTGCGTAAGAGTTGGCTTAAGCCACCTGCTGATTTAATCGCTCCAGCTGGTTCAGCTAGATCTTTGCTCAGTGACACGGCCTTAGTGGATGGCTCATCAGATTATGATCCAGTTTTGGCATTAACTACGGTTAATAACAAAACTTCTCAAGTTGTTCATCAAGATGAAGCCAATCCAGTTTCTAAACTTTCCAGCCCTTCTCATCCAAAATCTGGGTCCTCAGACCAGGTTGTAGTATTGAGGGTGTCTTTACATTGCAAAGGCTGTGAAGGGAAGGTGAGGAAGCATCTTTCCAGAATGCAAGGAGTTACTTCCTTCAACATAGATTTTGCGGCAAAGAAGGTGACAGTAGTTGGAGATGTTACTCCATTGAGTGTCTTGGCTAGCATATCAAAGGTGAAAAATGCACAGTTATGGCCAGCATCTGCCTCAGTAGTGGGATCTGGTACGcttgaaacaaagaaaaaaaaaattaactaa 828 0.4384 MKRIDIFCASQASTAICLSTDQASCSSSNTILLGGRAIDRHNPIINDSRRSTSKSLTAPCSSSQSPINPKPYHELHKAKKNSSSKSATKGHGQKKKSTAEKLTEHVTNTSKPIDGIVRKSWLKPPADLIAPAGSARSLLSDTALVDGSSDYDPVLALTTVNNKTSQVVHQDEANPVSKLSSPSHPKSGSSDQVVVLRVSLHCKGCEGKVRKHLSRMQGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQLWPASASVVGSGTLETKKKKIN 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2326 275 MobiDBLite consensus disorder prediction 48 69 - -
Ssu7g2326 275 SUPERFAMILY HMA, heavy metal-associated domain 192 249 IPR036163 GO:0046872
Ssu7g2326 275 MobiDBLite consensus disorder prediction 165 190 - -
Ssu7g2326 275 CDD HMA 195 248 IPR006121 GO:0046872
Ssu7g2326 275 MobiDBLite consensus disorder prediction 42 107 - -
Ssu7g2326 275 Pfam Heavy-metal-associated domain 196 248 IPR006121 GO:0046872
Ssu7g2326 275 ProSiteProfiles Heavy-metal-associated domain profile. 192 249 IPR006121 GO:0046872
Ssu7g2326 275 Gene3D - 190 253 - -
Ssu7g2326 275 PANTHER OS08G0405700 PROTEIN 1 271 IPR044526 -
Ssu7g2326 275 PANTHER COPPER CHAPERONE 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2326 Ssu-Chr7 45683293 45684427 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2326 - - gmx:100813295 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1097 4 17446600 17448508 Ssu7g2326 7 45683293 45684427 PCT