Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1097 ATGAAAGGCATAGACATCTTCTGTGCATCACAGGCCTCAACAGCCATATGTCTTAGCATGGATCAACCCTCTTCCTcctattcttcttcttccaacACCACTCAATTTGGTGGCAGAGCTATTGACCGCCACAACCCCATCATCACAGATCCAAGAAGAACCCCCTTCAGAGACCTCATTGCCCCTAGTTCCTCCTCTCACCCACACATCGACCCTAAACCTCTACATGATGTCCCAAAGGCCAAGAAAAACTCCACTTCCAAGCCAAGTggccagaaaaagaaaaatgcaacaaAGGGTCATGATCAGAAGAAGAAAAGTACTGTGGGAAAGTTGACTGAACAGATAACCAACAATTACTCTTCAAAACCAATTGATAGTATTCTGAGGAGGAGTTGGGTTAGGCCACCTTCTGATTTAATCACTCCTCCTGGTTCATCAAGATATTTGCTTGGTGACACGCCTTCCTTGGATGGTATATCAGTTTATGATCCTGTTTTGGCTTTAACCAACGTTGATAAGGAGAAAACTCAAGTCCTTCATCAAGATGTAACCAACTGTTCATCTAAACCCTCCACCTCCTCTCTTCCAAAAACTGGTTCCTCAGACCAGGTTGTAGTATTGAGGGTTTCTCTGCACTGCAAAGGCTGTGAAGGGAAGGTGAGGAAACATCTCTCTAGAATGCGAGGAGTAACGTCCTTCAACATAGACTTTGCGGCAAAGAAGGTTACAGTAGTTGGTGATGTGACTCCTTTGAGCGTATTGGCAAGCATATCAAAGGTGAAGAATGCACAATTTTGGCCAGAACCTGCTTCAGTTGTTGGATCCGGTGCCgcagaaacaaagaaaacaaatttgatcTAA 864 0.4132 MKGIDIFCASQASTAICLSMDQPSSSYSSSSNTTQFGGRAIDRHNPIITDPRRTPFRDLIAPSSSSHPHIDPKPLHDVPKAKKNSTSKPSGQKKKNATKGHDQKKKSTVGKLTEQITNNYSSKPIDSILRRSWVRPPSDLITPPGSSRYLLGDTPSLDGISVYDPVLALTNVDKEKTQVLHQDVTNCSSKPSTSSLPKTGSSDQVVVLRVSLHCKGCEGKVRKHLSRMRGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPEPASVVGSGAAETKKTNLI 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1097 287 MobiDBLite consensus disorder prediction 21 39 - -
Ssu4g1097 287 Pfam Heavy-metal-associated domain 208 260 IPR006121 GO:0046872
Ssu4g1097 287 PANTHER COPPER CHAPERONE 1 283 - -
Ssu4g1097 287 MobiDBLite consensus disorder prediction 21 115 - -
Ssu4g1097 287 CDD HMA 207 260 IPR006121 GO:0046872
Ssu4g1097 287 PANTHER OS08G0405700 PROTEIN 1 283 IPR044526 -
Ssu4g1097 287 Gene3D - 201 265 - -
Ssu4g1097 287 ProSiteProfiles Heavy-metal-associated domain profile. 204 261 IPR006121 GO:0046872
Ssu4g1097 287 SUPERFAMILY HMA, heavy metal-associated domain 204 261 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1097 Ssu-Chr4 17446600 17448508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1097 - - gmx:100810015 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1097 4 17446600 17448508 Ssu7g2326 7 45683293 45684427 PCT