Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2316 ATGAGTTATAGGAAAACGTGTTTTCTTTTCTGTCAAATGGGTAATTCTAAGGTGCCATGCGCGGTGACCGAAACCGTGATGCACGTCGTCGATTTTACTGCAGAAATGGCTCCACCTATTGAGACCACAAACAAGGTTTCCAACTACCATCATTCCCCACACCCTCCTCTTAATGAGAGGATTCTTTCATCCTTGACAAGGAGATCTGTTGCTGCACACCCGTGGCATGATCTTGAGATAGGACCCGAAGCTCCAAAGATCTTCAACTGTGTGGTCGAAATTGGGAAAGGAAGCAAGGTGAAATATGAACTTGACAAAAAAACTGGACTTATTAAGGTTGATCGTGTACTTTACTCATCAGTTGTGTATCCTCACAATTATGGGTTTATCCCACGTACAATTTGTGAGGACAGTGACCCCATGGATGTCTTGGTTATTATGCAGGAGCCAGTTCTTCCAGGTTGCTTTCTTCGAGCCAAAGCTATTGGACTCATGCCTATGATTGATCAGGGTGAGAAAGATGACAAGATAATTGCGGTCTGTGCTGATGATCCCGAGTATCGGCATTACAATGATATCAAGGACCTTCCTCCGCACCGTTTAGCTGAAATTCGTCGTTTTTTTGAAGATTACAAGAAGAATGAGAACAAGGAAGTTGCAGTAAACGACTTTCTTCCTGCCTCATCTGCCTATGAAGCGATCAAGCATTCCATGACCCTGTATGCGGACTATATTGTGGAGAGCTTGAGGCGGTAG 756 0.4418 MSYRKTCFLFCQMGNSKVPCAVTETVMHVVDFTAEMAPPIETTNKVSNYHHSPHPPLNERILSSLTRRSVAAHPWHDLEIGPEAPKIFNCVVEIGKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKDLPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASSAYEAIKHSMTLYADYIVESLRR 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2316 251 Hamap Inorganic pyrophosphatase [ppa]. 86 242 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ssu7g2316 251 PANTHER BNAC07G03580D PROTEIN 56 250 - -
Ssu7g2316 251 CDD pyrophosphatase 87 238 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ssu7g2316 251 Pfam Inorganic pyrophosphatase 90 241 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ssu7g2316 251 PANTHER INORGANIC PYROPHOSPHATASE 56 250 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ssu7g2316 251 SUPERFAMILY Inorganic pyrophosphatase 66 246 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ssu7g2316 251 Gene3D Inorganic pyrophosphatase 69 247 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ssu7g2316 251 ProSitePatterns Inorganic pyrophosphatase signature. 137 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2316 Ssu-Chr7 45404361 45407737 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2316 K01507 - gmx:100306101 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1112 4 17723142 17732852 Ssu7g2316 7 45404361 45407737 PCT