Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1112 ATGCAATATCATATGTACCACCTTGCCAAAAATGGACTCTGGGCAGAGCCTGGGATCCATACATTTGAGCCCCGGAGTAGTCCATGCCTTGCTACCTTGTATTTCTTTACGGGACAGAATAGCAAGCAGAGCCTGAAAGGTTTTCCCCTCCATCTCATCTCTTCTCTTTTGCTCTTTGCAGACACACACAAAAGCATTAACTTCTCTCACACACTTTATGTGTCTTTTCGAGATCTGTGCTTAAACCTTCACTTGCTTTGCTTCCTTCTGCAGACGAGCTTTACCTTGCGCCGATTTATTTTCTGTACTGTTTCAGAAGGGCCACCTGTGATGGTTGAAATCGAGATGGATACTGAAAATGCTGCAATTGTGGTTCCACTCAATGAGACTCCAAACAATGTTCCCGTCTCTCATCATTCCTCACATCCCCCTCTTAATGAGAGGATTATTTCATCCATGACCAGGAGATCTGTTGCTGCACACCCCTGGCATGACCTTGAGATAGGGCCTGGTGCTCCAATGATCTTCAATTGTGTGATTGAGATTGGGAAAGGGAGCAAGGTGAAGTATGAACTGGACAAAAAATCGGGGCTTATTAAGATCGATCGCGTGCTTTACTCATCAGTTGTGTATCCCCACAACTATGGGTTTATCCCACGTACAATTTGTGAGGACAGTGATCCCATGGATGTCTTGACTATTATGCAGGAGCCGGTTCTTCCAGGTTGCTTTCTTCGGGCCAAAGCAATTGGTCTCATGCCCATGATTGATCAGGGGGAGAAAGATGATAAAATAATCGCTGTGTGTGCTGATGATCCTGAGTATCGACATTACAATGATATCAAGGAGCTTCCTCCGCATCGTTTAGCTGAAATTCGTCGTTTTTTTGAAGACTACAAGAAGAATGAAAACAAGGAAGTTGCAGTAAACGACTTTTTGCCTGCCTCAGCTGCTTTTGAAGCGATTAAGAGATCCATGAGCTTGTATGCGGACTACATAGTGGAGAGCTTGAGGCGGTAG 1020 0.448 MQYHMYHLAKNGLWAEPGIHTFEPRSSPCLATLYFFTGQNSKQSLKGFPLHLISSLLLFADTHKSINFSHTLYVSFRDLCLNLHLLCFLLQTSFTLRRFIFCTVSEGPPVMVEIEMDTENAAIVVPLNETPNNVPVSHHSSHPPLNERIISSMTRRSVAAHPWHDLEIGPGAPMIFNCVIEIGKGSKVKYELDKKSGLIKIDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLTIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASAAFEAIKRSMSLYADYIVESLRR 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1112 339 ProSitePatterns Inorganic pyrophosphatase signature. 225 231 - -
Ssu4g1112 339 PANTHER BNAC07G03580D PROTEIN 145 338 - -
Ssu4g1112 339 SUPERFAMILY Inorganic pyrophosphatase 154 334 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ssu4g1112 339 CDD pyrophosphatase 174 327 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ssu4g1112 339 Pfam Inorganic pyrophosphatase 178 329 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ssu4g1112 339 PANTHER INORGANIC PYROPHOSPHATASE 145 338 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ssu4g1112 339 Gene3D Inorganic pyrophosphatase 157 335 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ssu4g1112 339 Hamap Inorganic pyrophosphatase [ppa]. 174 330 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1112 Ssu-Chr4 17723142 17732852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1112 K01507 - gmx:100784203 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1112 4 17723142 17732852 Ssu7g2316 7 45404361 45407737 PCT