Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2293 ATGTCAAGAACGAGAGTGGTCCTCGTCACCCTCACcctggtggtggtgacagttcTCAGCACAAAGAGATCAGAAGGTGCTCGTGCTTTCTTTGTGTTCGGGGACTCTCTGGTCGACAGTGGCAACAACAATTACTTGCCAACCACCGCACGCGCCGACTCTCCCCCCTACGGCATTGATTATCCCACCCATCGCCCCACCGGTCGCTTCTCCAATGGCTACAACCTCCCTGACCTTATCAGCCAGCATATTGGGTCTGATCCCACGTTACCATACTTGAGCCCAGAACTCACGGGACAAAAGCTATTAGTTGGGGCCAATTTCGCTTCCGCGGGGATAGGAATCCTTAACGACACGGGCATTCAATTTGTGGGGATCTTAAGAATGTTCCAGCAATTTGCGCTGTTCGAGCAGTACCAGCAGCGGTTGAGTGCAGAGGTGGGGGCAGCGCGGGCAAAGAGCATCGTGAATGGGGCGCTGGTGCTGATGACGCTGGGTGGTAACGACTTCGTTAACAACTATTTTCTGACTCCAGGGTCTGCCAGGTCTCGCCAATTCACTGTCCCCCAGTACTGCCGATACCTTACCTCCGAGTATCGAAAAATTCTTACGAGGCTGTATGAGTTGGGGGCTAGAAGGGTACTTGTGACCGGAACTGGTCCATTGGGTTGTGTTCCTTCTCAGCTTGCTACGAGGAGTACAAACGGAGAATGTGTGCCTGAGTTACAACAAGCTGCACAAATTTTCAACCCACTTTTGGTCCAAATGATCAGAGAAATCAACTCCCAAGTGGGCTCTGACGTTTTTGTTGCTGTCAATGCCTTCCAAATGAACATGAACTTCATCAGCGACCCTCAAAGATTTGGTTTTGTTACATCAAAGATAGCATGTTGCGGTCAAGGTCGTTTCAATGGGGTGGGACTGTGCACCGCCGTGTCAAACCTATGCCCAAACCGTGATATTTACGCATTTTGGGACCCTTATCACCCATCTCAACGTGCTCTGGGGTTTATCGTTCAAGACATCTTCAGTGGAACCTCTGACATTATGACCCCTATGAACCTTAGCACCATCATGGCCATTGACTCCAACATCTATTAA 1101 0.4932 MSRTRVVLVTLTLVVVTVLSTKRSEGARAFFVFGDSLVDSGNNNYLPTTARADSPPYGIDYPTHRPTGRFSNGYNLPDLISQHIGSDPTLPYLSPELTGQKLLVGANFASAGIGILNDTGIQFVGILRMFQQFALFEQYQQRLSAEVGAARAKSIVNGALVLMTLGGNDFVNNYFLTPGSARSRQFTVPQYCRYLTSEYRKILTRLYELGARRVLVTGTGPLGCVPSQLATRSTNGECVPELQQAAQIFNPLLVQMIREINSQVGSDVFVAVNAFQMNMNFISDPQRFGFVTSKIACCGQGRFNGVGLCTAVSNLCPNRDIYAFWDPYHPSQRALGFIVQDIFSGTSDIMTPMNLSTIMAIDSNIY 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2293 366 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Ssu7g2293 366 SUPERFAMILY SGNH hydrolase 30 340 - -
Ssu7g2293 366 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 362 - -
Ssu7g2293 366 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 6 362 - -
Ssu7g2293 366 Pfam GDSL-like Lipase/Acylhydrolase 31 335 IPR001087 GO:0016788
Ssu7g2293 366 Gene3D SGNH hydrolase 18 348 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2293 Ssu-Chr7 44968103 44973432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2293 29 359 Acyl Lipid Metabolism Gene Families AT4G10950 31.231 5.41e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2293 - - gmx:100800835 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1146 4 18230671 18234973 Ssu7g2293 7 44968103 44973432 PCT