Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2276 ATGCCCAGCCTCTGCACTGTTATATCCAATGTTTCTTCAACCTGCATATTCCGCGTTCAACCTCACCCACTTCTAAACTTGTACAATTTCCGGTCAAGGAGAAGGAAGCCTCGGTGCCGGGTCAGCATGTCCTCAGATCCTCAAAACGTCGTCGTTGTGGGATGTGGAGGGGTGTCAATCGATTTCTTGGCCACCGTTGCTGCTTACCCTAAGCCAGATGACAAAATCAGAAGCACCAGCTTGAAGGTTCAAGGAGGTGGTAATGCCGGTAATGCCTTAACCTGCCTTGCTCGCTTGGGCCTAAACCCAAGGCTCATTTCCAAGGTTGCTGATGACAGTCAAGGCAGGGGTATATTAGACGAGCTACAAGCTGATGGTGTAGATACATCCTTTATTGTGGTTTCTAAGGAGGGAACTTCgccatttacatatattattgtgGACAACCAAACGAAGACCCGTACTTGTATACATACCCCAGGATATCCTCCAATGATACCAGACGACCTGCCAAAATCAAGTTTGTTATCTGCATTGGATGGAgcaaaaattgcatattttgatgGGAGATTGCCTGACACTGCTCTAGTTGTTGCCCATGAGGCAGTTAGAAAGAATATACCCATCTTAATTGATGCAGAAAGACCAAGGGAAGGGTTGGATGATCTCCTAAAATTAGCTGATTATGTTGTATGCTCAGCAAAGTTTCCAAAAGTGTGGACAGAGGCATCAACTGTTCCACAAGCACTTGTTTCTATGCTTTTAATGTTGCCCAACATAAAATTCGTGATTGTAACTTTGGGGAAAGATGGTTGTATAATGCTGGAGAGAAGTGTTGATGCAGGTCCTTCCATGGAAGAAGTGGATGTAGACAGCTTATTGGAATCACTGGAGTTAAAAAGGAATAAGAGTGTATCCATTCCAACCTGCATATCATCATCGGTAGCAAAATTGAAGGCAGAGGGGATAGGAACAGTTAGTGGGAAGCTGTACATTGGAACAGCTGAGAGTATTCCACCATCAGAGCTCGTTGATACCACTGGTGCTGGGGATGCATTTATTGGAGCTGTTATCTATGCTATCTGTGCCAAGTTTACACCAGAGACAATGCTATCCTTTGCTGCTAATGTGGCAGGTGCCAAGTGCAGGGATCTAGGAGCACGAAGTGGTCTTCCATACTGTGCAGACCCACGCTTAGCATCCTATATATCGGAGAAGTTGGGTAGTGCAGCTTAA 1236 0.4409 MPSLCTVISNVSSTCIFRVQPHPLLNLYNFRSRRRKPRCRVSMSSDPQNVVVVGCGGVSIDFLATVAAYPKPDDKIRSTSLKVQGGGNAGNALTCLARLGLNPRLISKVADDSQGRGILDELQADGVDTSFIVVSKEGTSPFTYIIVDNQTKTRTCIHTPGYPPMIPDDLPKSSLLSALDGAKIAYFDGRLPDTALVVAHEAVRKNIPILIDAERPREGLDDLLKLADYVVCSAKFPKVWTEASTVPQALVSMLLMLPNIKFVIVTLGKDGCIMLERSVDAGPSMEEVDVDSLLESLELKRNKSVSIPTCISSSVAKLKAEGIGTVSGKLYIGTAESIPPSELVDTTGAGDAFIGAVIYAICAKFTPETMLSFAANVAGAKCRDLGARSGLPYCADPRLASYISEKLGSAA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2276 411 SUPERFAMILY Ribokinase-like 52 395 IPR029056 -
Ssu7g2276 411 PANTHER PFKB FAMILY CARBOHYDRATE KINASE 43 409 - -
Ssu7g2276 411 Pfam pfkB family carbohydrate kinase 335 392 IPR011611 -
Ssu7g2276 411 Pfam pfkB family carbohydrate kinase 56 277 IPR011611 -
Ssu7g2276 411 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 345 358 IPR002173 GO:0016773
Ssu7g2276 411 PRINTS Ribokinase signature 263 274 IPR002139 GO:0016301
Ssu7g2276 411 PRINTS Ribokinase signature 54 75 IPR002139 GO:0016301
Ssu7g2276 411 PRINTS Ribokinase signature 81 100 IPR002139 GO:0016301
Ssu7g2276 411 Gene3D - 50 389 IPR029056 -
Ssu7g2276 411 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 43 409 - -
Ssu7g2276 411 CDD ribokinase_group_B 59 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2276 Ssu-Chr7 44739553 44747763 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2276 - - gmx:100802550 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1155 4 18437749 18441707 Ssu7g2276 7 44739553 44747763 PCT