Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2256 ATGGGTATGATGAGAAAACGTTACTCTCATTctcatccttttctttttctcttcgtTGTTTTCTTGTTCGTTCTTCTTCCCGTTTCAGATGCAGATAACACAAACTTGGTTTACAAGGGTTGTGCAGATCAGAAACTGCAGGACCCATCTGGGATATACTCACAGAACCTCAAATCCCTCTTGGCTTCTCTGGTGTCACAATCTGAAAAAAAGGCCTTCTTCACCACAAACTCTGGGGAAGGCCAGGATGTGATCATGGGTCTCTACCAATGCAGAGGGGACCTCTCAAACACTGCTTGCTACGACTGCGTGAGCAAGATTCCCGATATGCTTGACAGGTTGTGTGGCAAGGTGGTGGCCGCGCGGGTTCAACTTATTGGGTGCTACCTGAGATACGAGGTTGTTGGGTTCAAGCAGGTACCTGAGACTCAATTGCTTTACAAGGTTTGTGGGTCCAAGAAGGAGAGTTATGATGACGGGTTCGAGGAGAGAAGGGACTCTGCCTTTGGCATGGTGGAAAGTGGTGTGAAAAATGGTGGAAACTTGTTTTACACGGGGAGCTACCAGTCTCTCTATGTGTTGGGGCAGTGTGAGGGTGATTTGGCCAAAGATGATTGTGGGGATTGTGTGAAGAGTGCTGAGGATCAGGCCAAAGCTGAGTGTGGTGACTCAATTTCTGCACAAATTTATCTACACAAGTGCTTTATTGGCTACAGCTTTTATCCTAAGGGAATATCCAACATGTCATCTTCTCCAGGCTCACTGGGGCAACAGGACACGCAGAGGACTATAGCTCTTGCAGTGGGAGCGTTTGCAGCTTTGGGTTTCTTAATGGCTTGTTTGTTATTTCTCAAATCAgtgttgaagaaaaaaagtgataagTATTGA 888 0.4426 MGMMRKRYSHSHPFLFLFVVFLFVLLPVSDADNTNLVYKGCADQKLQDPSGIYSQNLKSLLASLVSQSEKKAFFTTNSGEGQDVIMGLYQCRGDLSNTACYDCVSKIPDMLDRLCGKVVAARVQLIGCYLRYEVVGFKQVPETQLLYKVCGSKKESYDDGFEERRDSAFGMVESGVKNGGNLFYTGSYQSLYVLGQCEGDLAKDDCGDCVKSAEDQAKAECGDSISAQIYLHKCFIGYSFYPKGISNMSSSPGSLGQQDTQRTIALAVGAFAALGFLMACLLFLKSVLKKKSDKY 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2256 295 Pfam Salt stress response/antifungal 158 240 IPR002902 -
Ssu7g2256 295 Pfam Salt stress response/antifungal 48 133 IPR002902 -
Ssu7g2256 295 ProSiteProfiles Gnk2-homologous domain profile. 34 137 IPR002902 -
Ssu7g2256 295 Gene3D - 32 137 IPR038408 -
Ssu7g2256 295 Gene3D - 142 242 IPR038408 -
Ssu7g2256 295 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 8 292 - -
Ssu7g2256 295 PANTHER PLASMODESMATA-LOCATED PROTEIN 1 8 292 - -
Ssu7g2256 295 ProSiteProfiles Gnk2-homologous domain profile. 143 243 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2256 Ssu-Chr7 44496688 44497979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2256 17 242 Receptor kinase-like Gene Family AT4G05200 25.620 4.65e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2256 - - gmx:100795002 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1186 4 18900756 18935045 Ssu7g2256 7 44496688 44497979 PCT