Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2243 ATGTCCGGCAGCAAGGTGAAGGGCCTTCTTAAAGGTCTTAGATACATATCTCAGATATTTGagaatgaaaaagaacaagatatACAGATTGGATATCCCACGGATGTAAAGCACGTGGCCCACATAGGGTGGGATGGTCCCTCTGTAAATTCTCCCAGCTGGATGAACGAATTTAAAACTTCTCCAGGATTTGCATCAGCACCTATAAATCTTACTGGAGATGGTCAAAATAAAGGACAGGATAATGCAGTCAAATGGGTCTCCGAAGATACAAGGAGAAGAAATACTCGAGACTTGCCGGAATTACCCAAGCCATCTAAAAGGCAGTCAACGGGTGGAGTCACGGATTCTCCGACGAGGGAAAAGTCAAACAAACCAAGGCAATCAAGGAAGTCATCCAACAAACCCAGAGACGAATCCAACCCGACCCAACAACCCGTATCCACGGATTCATTCCACCCGTCCCCAACCCTACCGGATATTCCTAAAAAGTCTCGTCGCCAGAGGTCAAAAGAGAATTCTAGTGGCGGGTCATCCAAATTGAGATCCAAAGCCCAACCCACTTCGGATGCTGGATCCCCAACCCAATCCAAGTCCAGGAACAAACCAAGGTCctttgaagaaaatgaaacaggAATGGACAGGATATCTTGA 654 0.4419 MSGSKVKGLLKGLRYISQIFENEKEQDIQIGYPTDVKHVAHIGWDGPSVNSPSWMNEFKTSPGFASAPINLTGDGQNKGQDNAVKWVSEDTRRRNTRDLPELPKPSKRQSTGGVTDSPTREKSNKPRQSRKSSNKPRDESNPTQQPVSTDSFHPSPTLPDIPKKSRRQRSKENSSGGSSKLRSKAQPTSDAGSPTQSKSRNKPRSFEENETGMDRIS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2243 217 MobiDBLite consensus disorder prediction 138 155 - -
Ssu7g2243 217 MobiDBLite consensus disorder prediction 201 217 - -
Ssu7g2243 217 MobiDBLite consensus disorder prediction 59 84 - -
Ssu7g2243 217 CDD CRIB 28 61 - -
Ssu7g2243 217 MobiDBLite consensus disorder prediction 85 104 - -
Ssu7g2243 217 MobiDBLite consensus disorder prediction 59 217 - -
Ssu7g2243 217 ProSiteProfiles CRIB domain profile. 30 43 IPR000095 -
Ssu7g2243 217 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 5 190 IPR044510 -
Ssu7g2243 217 Gene3D CRIB domain 23 64 IPR036936 -
Ssu7g2243 217 MobiDBLite consensus disorder prediction 120 137 - -
Ssu7g2243 217 MobiDBLite consensus disorder prediction 174 200 - -
Ssu7g2243 217 SMART PBD_5 30 61 IPR000095 -
Ssu7g2243 217 Pfam P21-Rho-binding domain 29 81 IPR000095 -
Ssu7g2243 217 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC7-LIKE ISOFORM X1 5 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2243 Ssu-Chr7 44213548 44215479 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2243 - - cam:101503176 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1211 4 19226091 19227892 Ssu7g2243 7 44213548 44215479 PCT