Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2234 ATGGCCACACGCGTAACATTAGTAGCAGCAGCAGCATTTCTActgcttcttcttctccccttctctttctctatctctcatTCTCACCGATCCGCCGCCATCCACCTCTTTGCTTCAACTCCCGCAAGTTTAGAAGATGCGTACGAGGCACTTAGAGTTTTTGAGATTCTCGGAATCGAAGAGAAGAAGGCTCCTGTGAGCACGGCCACGTGTCACAGAGTGTTGGAAAATCTAGGCTCGTCTTCCCGGCTCAAGGATTTGTTCTACGCCTTGAAAGTTAACGCCATATTAAAATGCAATGTTAATGAGAAGGTTTTCAAGgATATTGCTTCAAGACTTAAAGCTACTGTCCATGATGCGAGTACTTTGCTTGACATATACTACTCAATTGGAGGTTTGGTTCTTATAAAGGATCAGGATTCTAATGTTCACGTGCTTCTTGCTGATTTTGATGGGGTTTTTCAATCAATCAAGGCTCTCAGTCAAAGTGATGGAAGATGGCGCTATAGTTCTGATAATCCAGAGTCCAGTACCTATGCTGCTGGATTAGCACTTGAAGCTCTTGCTGGAGCAATTTCACTAGCATCTTCTGAAATTGATCAGTCTAAGGTCAATATAGTGAAAAATGACATAGTAAAGCTTTTTGATGGCATTGAGAAATGTGATGATGGAACCTTTTATTTTGATGAGAAGTTTGTTGGTGGACATGAGCAACAGGGTTCTCTTTCCACAACTTCTTCAGTTGTTAGAGGGGTTACTGCATTTGCTTCTGTAACTTctggaaaaataaatCTTCCAGGGGATAAAATATTGGGTTTGGCAAAATTTTTCTTGGGCATTGGAATCCCAGGAGATGCCAAAGACTTCTTTAATCAAGTTGAGTCATTAGCTTTTCTAGAGAGCAACAGGATTTTCATTCCATTGATATTGTCACTCCCTGAAACAGTTTATTCGTTGACCAAGAAAGGCCATCTTAAGGTTAAGGTGAATACAGTGCTTGGGTCAGCTGCGCCACCTTTAACAGTTAAGCTTGTCCGTGCTTTTAGCACTGATGCAAAAGATTCAGCTATTATTGACAGCAAGGAGCTCCAGTATGACCAAGAAAGTGGATTTCATGTCTTGGATGCTTTCCCAAAGAATGTGGATGTGGGGACATATGTGTTTGTTTTTGAGATAGTGCTTCATGATTCTGGCAGTGAAAAAGTTTATGCAACTGGAGGCCAAATTCATGTACCAATATATGTCACTGGAATTATTGAAGTTGGCAATGCAAAAATCACAGTTCTGGACAGTGATCTTGGAAGTACTGAAACCCAGAAAAAGCTGGATTTGGCTGGAAATGATGTTGTTTCACTCGCAGCTAACCACCTGCAGAAGTTGAGGTTTTCTTTCCAATTGACAACTCCTCATGGTCATGTTTTTAAGCCTCATCAGGCATTTTTCAAGTTGAGACACGAGACAAAGGTTGAACACGTCTTTGTGGTTGGAAATACTAGCAAGAAGTTTGAGATAATTCTTGATTTTCTTGGCTTGGTGGAGAAACTTTTTTATCTCTCGGGTAGATATGACATTGAGCTTACTGTTGGTGATGCTGTCATGGAGAACTCTTTGTTACGGCTACTTGGCCATGTCGAATTAGATCTTCCAGAAGCACCTGAGAAAGCAGCCCGTCCTCCACCACCACCTGTTGACCCTTACTCAAGATATGGGCCCAAAGCAGAGATTAGCCATATATTCAGGGCTCCTGAAAAGAGACCACCCCAGAAACTCTCTCTTGTTTTCTTGGGTTTGATCCTTTTGCCATTCATTGGCTTTTTGGTTGGGTTGTTGCGTGTGGGGGTGAACCTAAAGAATTTCCCTGGTTCAACAGTACCTGCTACATTTGCGATCCTTTTCCATCTTGGTATTGCTGCGGTTTTATTACTTTATGTACTTTTCTGGTTGAAGCTGGACCTGTTCACTACACTCAAAACATTTGGTCTTTTGGGAGCTTTTCTGATGTTTGTTGGGCACAGAATTCTTTCTCATATCGCTTTGACATCAGCCAAGTTGAAATCTGCATGA 2064 0.4075 MATRVTLVAAAAFLLLLLLPFSFSISHSHRSAAIHLFASTPASLEDAYEALRVFEILGIEEKKAPVSTATCHRVLENLGSSSRLKDLFYALKVNAILKCNVNEKVFKDIASRLKATVHDASTLLDIYYSIGGLVLIKDQDSNVHVLLADFDGVFQSIKALSQSDGRWRYSSDNPESSTYAAGLALEALAGAISLASSEIDQSKVNIVKNDIVKLFDGIEKCDDGTFYFDEKFVGGHEQQGSLSTTSSVVRGVTAFASVTSGKINLPGDKILGLAKFFLGIGIPGDAKDFFNQVESLAFLESNRIFIPLILSLPETVYSLTKKGHLKVKVNTVLGSAAPPLTVKLVRAFSTDAKDSAIIDSKELQYDQESGFHVLDAFPKNVDVGTYVFVFEIVLHDSGSEKVYATGGQIHVPIYVTGIIEVGNAKITVLDSDLGSTETQKKLDLAGNDVVSLAANHLQKLRFSFQLTTPHGHVFKPHQAFFKLRHETKVEHVFVVGNTSKKFEIILDFLGLVEKLFYLSGRYDIELTVGDAVMENSLLRLLGHVELDLPEAPEKAARPPPPPVDPYSRYGPKAEISHIFRAPEKRPPQKLSLVFLGLILLPFIGFLVGLLRVGVNLKNFPGSTVPATFAILFHLGIAAVLLLYVLFWLKLDLFTTLKTFGLLGAFLMFVGHRILSHIALTSAKLKSA 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2234 687 Pfam Oligosaccharyltransferase subunit Ribophorin II 19 678 IPR008814 GO:0006487|GO:0008250|GO:0016021
Ssu7g2234 687 PANTHER RIBOPHORIN II 24 687 IPR008814 GO:0006487|GO:0008250|GO:0016021
Ssu7g2234 687 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 24 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2234 Ssu-Chr7 44084757 44092110 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2234 K12667 - gmx:100814831 1089.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2234 7 44084757 44092110 Ssu7g2234 7 44084757 44092110 ECH
Ssu4g1215 4 19283228 19302935 Ssu7g2234 7 44084757 44092110 PCT