Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2233 ATGGTGAAATGTGATTCCTATGCAGTGGCAAGAATGGCCAGAGGAAGAGCAGATGGGAAGCCAAGAAAGCGGTTGGTCCCAACTGTGTTAGTTTTAGTGATTGTTGGTGCTTTATTTTTCCTGTATTCTAGGAAAAGTGGTTCATCTTCTATTGAGTATGGTAGCAAATCTTCAACTTTAAAATTTGGAGGAGATGACAGTGCTATACCAAAGACCATTCCAGTCTGTGATGATAGTCTTTCGGAGCTAATTCCATGTCTAGACAGAAATTTCATATACCAAACAAGATTGAAGCTTGATCTGACTTTGATGGAGCACTATGAGCGACATTGCCCAATGCCTGAGAGGCGTTATAATTGTTTGATTCCCCCTCCTCCAGGGTACAAGATTCCAATCAAGTGGCCCAAAAGCAGAGATCAGGTATGGAGGGCAAATATACCTCATATCCATCTTGCAACTGAGAAATCTGACCAGAATTGGATGGTCGTAAAAGGTGAAAAGATAGTTTTTCCTGGTGGAGGAACCCACTTCCATTATGGTGCTGACAAATATATTGCATCAATTGCCAATATGCTCAACTttccaaataatattataaacaatggAGGAAGACTTCGCAATGTTTTTGATGTTGGCTGTGGTGTTGCAAGCTTTGGAGGATATCTTCTTTCTTCTGATGTAATAGCAATGTCATTAGCACCAAATGATGTTCATGAAAACCAAATACAGTTTGCTTTAGAAAGAGGAATTCCTGCGTATCTTGGTGTTTTGGGGACACTAAGACTCCCTTACCCTAGTAGATCTTTTGAACTTGCCCATTGTTCTCGCTGTAGAATTGATTGGCTTCAAAGAGATGGCATACTTCTTCTTGAACTAGATAGGTTACTCAGGCCAGGAGGCTACTTTGCCTACTCATCTCCTGAAGCCTATGCTCAGGATGAAGAGGATCGGAGAATATGGAAAGAAATGAATGCTCTTGTAGGGCGGATGTGTTGGAAAATAGCTGCTAAAAGGAACCAGACTGTCATATGGGTCAAGCCTCTTACAAATGACTGTTACTTAAAAAGAGAGCCTGATACTCACCCTCCGCTCTGCAGACCTGATGATGATCCTGATGCTGTTTGGGGAGTTAAAATGAAAGCTTGCATCACTGCAGCAAAAGGAACTGGTTTGGCTCCTTGGCCTGCTCGATTGACTACTCCACCTCCTCGTCTTGCTGACTTTAACTATTCTACTGAAATGTTTGAAAAGGACatgATATATTGGCAAAAAGAAGTTGCTAATTACTGGAAAATGCTAGGCAATAAAATTAAGCCTGACACAATTCGGAATGTGATGGACATGAAGGCAAATTTGGGTTCATTTGCAGCTGCTTTGAAGGACAAAGATGACAAAGATGTTTGGGTTATGAATGTAGTGCCAGAAAATGGACCAAACACTCTCAAGATCATATATGACAGAGGGCTGTTAGGAACGGTTCACAACTGGTGTGAAGCATTTTCAACCTACCCTCGTACCTATGATTTGCTCCATGCATGGACTATATTTTCTGATATCATTGAGAAAGAATGCAGTCCAGAGGATTTACTGATTGAGATGGATAGAATCCTGAGGCCAAAAGGTTTCATCATTGTCCATGATAAGCAGTCAGTGGTGTTGTCTATAAAGAAGTTCTTGCCAGCATTGCACTGGGTTGCGGTGGCCATATCTAATGTAGAGCAAGATTCAGACCAAGGCAGAGATGATGCAGTGTTAATAATTCAGAAGAAGATTTGGCTGACAAGTGAGAGTATCCGGGTTTCAGAATAA 1809 0.4096 MVKCDSYAVARMARGRADGKPRKRLVPTVLVLVIVGALFFLYSRKSGSSSIEYGSKSSTLKFGGDDSAIPKTIPVCDDSLSELIPCLDRNFIYQTRLKLDLTLMEHYERHCPMPERRYNCLIPPPPGYKIPIKWPKSRDQVWRANIPHIHLATEKSDQNWMVVKGEKIVFPGGGTHFHYGADKYIASIANMLNFPNNIINNGGRLRNVFDVGCGVASFGGYLLSSDVIAMSLAPNDVHENQIQFALERGIPAYLGVLGTLRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDRRIWKEMNALVGRMCWKIAAKRNQTVIWVKPLTNDCYLKREPDTHPPLCRPDDDPDAVWGVKMKACITAAKGTGLAPWPARLTTPPPRLADFNYSTEMFEKDMIYWQKEVANYWKMLGNKIKPDTIRNVMDMKANLGSFAAALKDKDDKDVWVMNVVPENGPNTLKIIYDRGLLGTVHNWCEAFSTYPRTYDLLHAWTIFSDIIEKECSPEDLLIEMDRILRPKGFIIVHDKQSVVLSIKKFLPALHWVAVAISNVEQDSDQGRDDAVLIIQKKIWLTSESIRVSE 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2233 602 PANTHER METHYLTRANSFERASE PMT1-RELATED 17 600 - -
Ssu7g2233 602 Gene3D Vaccinia Virus protein VP39 197 342 IPR029063 -
Ssu7g2233 602 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 17 600 IPR004159 GO:0008168
Ssu7g2233 602 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 362 IPR029063 -
Ssu7g2233 602 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 82 589 IPR004159 GO:0008168
Ssu7g2233 602 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 413 548 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2233 Ssu-Chr7 44078828 44082438 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2233 - - gmx:100819500 1093.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2233 7 44078828 44082438 Ssu7g2233 7 44078828 44082438 ECH
Ssu7g2233 7 44078828 44082438 Ssu4g1216 4 19305229 19311532 PCT